| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1488 |
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| Symbol | |
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| ID | 6242979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1680399 |
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| End bp | 1684787 |
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| Gene Length | 4389 bp |
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| Protein Length | 1462 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642593272 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001857716 |
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| Protein GI | 186476246 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATG TACCCAAAAG CTCCGCTGGA GCCGATACGA AAAACGCTCC GTCCGATAAC
GCGAAAGACG CCGCGAACCC CGTGCCGCGC GGCCATCGGC ACGAGAAACA CGAGGCGCGC
GGCAACGCAC CTCGCAGTGA CGTTTCCGTG AATGCTGCGA ATGCGCCCCT GACGGGCGCT
TCCACGCACG GCGAAGCAAA CACACGCGAA AGCGCGGGCG CGGCGAAGAG TGGCGCGCGG
GAGGCGCAGA ATCGCGCGGA GAACCGCGCG CAGAACGCGC GGCAGGACCG GCAGGGCAAG
CGTAGCGGAC CGAATCCGGC AGGCGGCACG GCGCGGCAGC AGACGCGTCC GGAAGACCGT
GCACGCGCGG GTAATCAGTC CGGCGCCGAC AAGCCGCGCA ATGCGCCGCG CGAGCCGCAG
AAGCCCGCTC GCGTCGTCGA ACCCAACCCC ATTCCGCCAA TCACGTTCCC CGAAGCGTTG
CCGGTGTCGG GCCGCCGCGA GGAAATCGCG CGAGCGATTG AAGGACATCA GGTCGTGATC
GTCAGCGGCG AGACGGGCTC GGGCAAGACG ACACAGTTGC CGAAAATCTG TCTCGCGCTC
GGACGCGGAC TCGGCGCGGG GGGCGGCGGG CTGATCGGTC ATACGCAGCC GCGCCGCATC
GCGGCCTCGG CGACGGGCCG GCGCATCGCC GAGGAACTCG GCACGCCGTT CGGCGAAGTG
GTCGGCTACA AGGTGCGCTT CACCGACAAT CTCTCGCCCG GCGCGTCCGT CAAGCTGATG
ACGGACGGCA TTTTGCTCGC GGAAACGCAG ACCGATCCGC TGCTGAAGGC GTACGACACG
CTGATCATCG ACGAAGCGCA CGAGCGCAGC CTGAACATCG ATTTTCTGCT CGGCTATCTG
AAAGAGATTC TGCCGAAGCG TCCCGATCTG AAGCTGATTG TGACCTCGGC GACCATCGAC
GCCGATCGTT TCGCGCGTCA TTTCGGCAGC GAAGAAAAGC CCGCGCCCGT GATCGAAGTG
AGCGGGCGGC TGTATCCCGT CGAGGTGCGC TATCGGCCCG TCGCCGACGA TTCGCCGGCA
GTGAAGGCGG CTGAGGGCAA CTCCGGCCGC GAACATCGGC CGGATCGTCC GAAAACGCAG
CGCGAGACCG ATCGCGACCT GATGGACGCG ATCGTCGAAG CCGCCGACGA ACTGTGCCGC
GAAGGTCCCG GCGACGTGCT CGTGTTTCTG CCCGGCGAGC GCGAAATTCG CGACGCGGCG
GAAGCGCTGC GTAAGCACCA TCCACCGCAC ACGGAAATCC TGCCGCTGTT CGCACGGTTG
TCGGCGGCCG AGCAGGAGCG CGTGTTCCGG CCATCGAACG CGCGGCGCAT CGTGCTCGCG
ACCAACGTCG CGGAAACCTC GCTGACAGTG CCGGGCATCC GCTACGTGAT CGACACGGGC
CTCGCGCGCG TGAAGCGCTA CTCGTATCGC AACAAGGTCG AGCAGTTGCA GGTCGAGGCG
ATTTCGCAAG CGGCCGCGAA CCAGCGCGCG GGGCGCTGCG GCCGCGTTGC CGACGGCATC
TGCATCCGTC TGTACGAAGA AGCCGATTTC CAGGCGCGTG TGCGCTTCAC GGATCCGGAA
ATTCTGCGTT CGTCACTGGC GGCCGTCATT TTGCGGATGA AGTCGCTGCA TCTGACGGCG
ATCGAAACGT TTCCATTCAT CGAACCGCCG CCCGGCCGCG CGATCGCCGA CGGCTATCAG
TTGCTCAACG AGCTCGGTGC CGTCGACGAC GACAACGCGC TCACGCCGCT CGGCCGTGAA
CTGGCACGTC TGCCGCTCGA TCCACGCGTC GGGCGGATGA TTCTCGCCGC GCGTGACCAG
CTCGCGCTGC GCGAGGTACT GATCATCGCG AGCGCGCTGT CCGTGCAGGA CCCGCGCGAC
CGCCCGATCG ACGCACAGGA GCAAGCCGAT CAGGCACACC GCAAGTTCGC CGACGAGCGC
TCCGAGTTTC TGCAATGGCT GAAAATCTGG ACGTGGTTCG AAGAGGCGGT TGCGCACAAG
AAATCGAACA GGCAGCTGAC CGACGCTTGC CGGCAGAATT TCCTCTCGCA TCTGCGTCTG
CGCGAATGGC GCGACGTGCA TTCGCAACTG CTCACCGTGG TGCGCGAGCA CGGCTGGCGT
CTGAACGAGA GCGAAGCAAC CTTCGAGCAG ATCCATCTCG CGCTGCTGAC GGGCCTCCTT
GGCAACATCG GTCTCAAAGC CGACGACGAG CCGTACTATC TCGGCGCGCG CGGGATCAAG
TTCTATTTGT GGCCGGGTTC GGCGCTCGTG AAGAAAGCGG GCAAATGGGT GATGGCGGCC
GAACTTATCG AAACGAGCCG CCTGTACGCG CGCTGTATCG CGAAGATCGA GCCGGAATGG
GTCGAGCGCG TCGGCGCGCA TCTGTTGAAG AAGTCGCTGT CCGAACCGCA CTGGGAAAAG
CGCGCCGCGC AGGTGACGGC ATTCGAGCGC GCGATGCTAT ATGGTCTGCC TGTCTATCAC
CGGCGGCGCG TCAGCTTCGG CAAGCAGGAT CCCGCGCGCG CGCGGGAATT GTTCATCCGT
GGCGCGCTCG TGGAAGGGGA GTTCGACACG AAGCTCGCGT TCTTCGCGCA CAACCGCAAG
CTGCTCGCCG ATATCGAACA GCTCGAACAC AAGTCGCGCC GTCAGGACGT GCTGGTCGAC
GACGAACTGA TCTACGCGTT CTACGATCAG GCAATTCCGA ACGGCATCCA TACGGGCGCC
GCGTTCGAGC GCTGGTATCG CGACGAAGTG AAGAAGAGCG GGCAGCAGGA AGACAAGCTG
CGGCTGCTGT ACCTGTCGCG CGACGATCTG ATGCGCCATG AGGCTGCTGG CGTCACGACG
GATCTGTTCC CAAAGCGGAT GACGATGGCG GGCGTCGACA TGGCGTTGAC TTATCACTTC
GAGCCGGGCT CGCCGCGCGA TGGCGTGACG CTTGCCGTGC CGCTGTATGC GCTGAATCAA
GTGGATACGC GGCGCGTCGA GTGGCTCGTG CCCGGAATGC TCAGGGAAAA GACGCAATTG
CTGCTCAAGT CGCTGCCGCA AAAGCTGCGC CGCCACGTCG TGCCGTTGCC GGAATATGCG
GCGGGATTCG TCGAACGGCA CAGCGGGCCG CCCTTTGGCG CTGGCGGCCT GCTCGATACG
GTGATCGCCG ACGTGCGGGA GCAGACGCAA GTCGCGACGA AGCAGTCGGA CTACAAGCTC
GAGACGCTCG CGCCGCATCT GTTCATGAAC TTCAAGGTCA TCGACGAGCA TGGACGGCAG
CTCGCGATGG GCCGCAACCT CGCGCAATTG CGCGCGGAGC TGGGCGGTCA GGCGCAGCAG
CAGTTCCAGA AGATCGCGAC GAGCGCGGCG GGCGCAGCGC TCGCGAATGT GGGTTCCGGC
GGCGACGCGT CTGCGCGTGC TGCTGCGTCC GGCGCCGCCG CAGGCGCTGG ACGTGGCGCG
TCCGCCGCGC CTCGCACGCC GACGGCAGGC GAAGCTGCCG CCGCGCCCGC CACCGCGCTC
TACGAAAACC TGACGACGTG GAACTTCGGC AAGCTGCCCG AGTTGCTCGA AATCCGGCGG
GGCGGGCAGA CGCTGTTCGG TTATCCCGCG CTCGTCGATC GCGGCACGCA TTGTGACGTC
GAAGTGTTCG ATTCGCCCGA CGAGGCGGCG CGGATTCATC GCGCGGGCTT GCGGCGGCTT
TTCGCACTGC AGTTACGAGA GCCGATCAAG TACCTCGAAA AGAATCTGCC GGGACTGCGC
GAAATGGCGA TGCAGTTCAT GCCGCGCGGC ACGCAGGAGG AATTGCGCGA TCAGCTTATC
GATACGGCCC TCGACCGCGC GTGCCTGCAA GAACCGCTGC CTGACGACGA CGCCAGCTTT
CACGCCCGCA AGGACGAAGG CCGAAGCAGG CTCACGTTAC TGGCGCAAGA GATTGCCCGG
CTCGTCGGGC AGATTCTTGG CGAGTATTCG GCCGTCCTCA AAAAGCTCGC GCAGGCCAAG
CCGTTCGCCG CCGCGTACGC CGACATGCAC GCTCAGCTCG ATGCGCTGAT CGGCAAACGC
TTCGTCGTCG ATACGCCGTA TGCGCAGCTG TCGCATTTCC CGCGCTATCT GAAGGGCATT
GCACTGCGCA TCGACAAGCT GAAAGCGGAC CCGGCACGCG ATGCTCGCCA GTTCGCCGAA
TTGCAGCCGC TCGCGCAGCA TTACCAGCGT GCGCTCGGGC AGCGCGGCGG CGTGCCGGAT
GTGCGGCTCG CCGAGTTCCG CTGGCTGCTG GAGGAACTGC GCGTGTCGTT GTTCGCGCAG
GAGCTGCGCA CGCCGATGCC CGTCTCTGTC AAGCGGCTCT ATAAGGTCTG GGAGTCGATG
CAGCGCTGA
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| Protein sequence | MSNVPKSSAG ADTKNAPSDN AKDAANPVPR GHRHEKHEAR GNAPRSDVSV NAANAPLTGA
STHGEANTRE SAGAAKSGAR EAQNRAENRA QNARQDRQGK RSGPNPAGGT ARQQTRPEDR
ARAGNQSGAD KPRNAPREPQ KPARVVEPNP IPPITFPEAL PVSGRREEIA RAIEGHQVVI
VSGETGSGKT TQLPKICLAL GRGLGAGGGG LIGHTQPRRI AASATGRRIA EELGTPFGEV
VGYKVRFTDN LSPGASVKLM TDGILLAETQ TDPLLKAYDT LIIDEAHERS LNIDFLLGYL
KEILPKRPDL KLIVTSATID ADRFARHFGS EEKPAPVIEV SGRLYPVEVR YRPVADDSPA
VKAAEGNSGR EHRPDRPKTQ RETDRDLMDA IVEAADELCR EGPGDVLVFL PGEREIRDAA
EALRKHHPPH TEILPLFARL SAAEQERVFR PSNARRIVLA TNVAETSLTV PGIRYVIDTG
LARVKRYSYR NKVEQLQVEA ISQAAANQRA GRCGRVADGI CIRLYEEADF QARVRFTDPE
ILRSSLAAVI LRMKSLHLTA IETFPFIEPP PGRAIADGYQ LLNELGAVDD DNALTPLGRE
LARLPLDPRV GRMILAARDQ LALREVLIIA SALSVQDPRD RPIDAQEQAD QAHRKFADER
SEFLQWLKIW TWFEEAVAHK KSNRQLTDAC RQNFLSHLRL REWRDVHSQL LTVVREHGWR
LNESEATFEQ IHLALLTGLL GNIGLKADDE PYYLGARGIK FYLWPGSALV KKAGKWVMAA
ELIETSRLYA RCIAKIEPEW VERVGAHLLK KSLSEPHWEK RAAQVTAFER AMLYGLPVYH
RRRVSFGKQD PARARELFIR GALVEGEFDT KLAFFAHNRK LLADIEQLEH KSRRQDVLVD
DELIYAFYDQ AIPNGIHTGA AFERWYRDEV KKSGQQEDKL RLLYLSRDDL MRHEAAGVTT
DLFPKRMTMA GVDMALTYHF EPGSPRDGVT LAVPLYALNQ VDTRRVEWLV PGMLREKTQL
LLKSLPQKLR RHVVPLPEYA AGFVERHSGP PFGAGGLLDT VIADVREQTQ VATKQSDYKL
ETLAPHLFMN FKVIDEHGRQ LAMGRNLAQL RAELGGQAQQ QFQKIATSAA GAALANVGSG
GDASARAAAS GAAAGAGRGA SAAPRTPTAG EAAAAPATAL YENLTTWNFG KLPELLEIRR
GGQTLFGYPA LVDRGTHCDV EVFDSPDEAA RIHRAGLRRL FALQLREPIK YLEKNLPGLR
EMAMQFMPRG TQEELRDQLI DTALDRACLQ EPLPDDDASF HARKDEGRSR LTLLAQEIAR
LVGQILGEYS AVLKKLAQAK PFAAAYADMH AQLDALIGKR FVVDTPYAQL SHFPRYLKGI
ALRIDKLKAD PARDARQFAE LQPLAQHYQR ALGQRGGVPD VRLAEFRWLL EELRVSLFAQ
ELRTPMPVSV KRLYKVWESM QR
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