Gene Bphy_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1480 
Symbol 
ID6242971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1670590 
End bp1671732 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content62% 
IMG OID642593264 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_001857708 
Protein GI186476238 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.474299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATTGA AGAACCTGAT CAAGGCCAGA AAAGGGCATG CCGACGCACT GTCGGATGAC 
GCGCAACTCG TCGACTCCGG TTTGCTGCCG GGCTTCGAGG CGTTGCCCAC TGTCGTGCTC
GTGCTCGACA AGCGGACGCT GCGGGTCGCG TTCGCGAATC CGTCGGCCGA GTCGATGCTC
GAAATGTCGC GCCGGCAACT CACGCAAATG GCGTGGCCCG ACATCTTCGC GAACGGCGAG
GAGCTGACGG CGACTATCGC TGCCATCGCC GCTCACCGTT TTCATGCGAC GCATCTCGAT
GCCGTGCTCG AGCGCCCAGG CCACGAGCCG TTGCATGTGC ATGCTGTCGT CGGCTTTCTG
GAAAGCGCGC AGGACTACGT GCTGCTCGAA CTGTTCGAGA ACGAGCGGCA TCTGAGATCG
GATCGCGAAG AGCGCATTCA CGATCTCACG GCAGTCAACA AGCAGTTGAT CCGCAATCTC
GCGCATGAGA TCAAGAATCC GCTCGGCGGC ATTCGCGGCG CGGCGCAGTT GCTCGAGTTC
GAACTCGGCG AGCGCGAACG CGACGAACTG CGCGAGTACA CACAGGTCGT CATCAAGGAA
TCGGACCGGC TGCAGACGCT CGTCGACCGG CTGCTCGAGC CGCATCGTCA TCCGCATATC
GTCGGCGACG TGAACATCCA CGAAGTGTGC GAACGCGTGC GCGCCGTGAT TCTCGCGGAG
TTTCCGCGTG GCCTCACGAT CGAGCGCGAC TACGACGTGA GCGTGCCTGA TCTGCGCGGC
GACAAGGAGC AGCTGATCCA GGCGCTGCTG AACATCGTGC GCAATGCGGC CGAGGCATTG
CGCGAACGCA TTTCGCAGGG TGATGCCCGC ATCGAGTTGC GCACGCGCGT CGCGCGCAAG
GTGACGATCG CGAAACGTCT TTGCAAGCTG GCACTGGACT TGCATATCGT CGACAACGGA
CCCGGCATTC CCGAGGACAT ACGCGAACGC ATCTTCTATC CGCTCGTATC GGGCCGTGAA
GATGGCAGCG GTCTTGGCCT GACGCTCGCG CAGACCTTCG TTCAACAGCA CGAGGGGATG
ATCGAAGTGG AGAGCCGTCC GGGTCATACC GAGTTTCAGA TCCTGCTGCC GCTCGACGTC
TGA
 
Protein sequence
MVLKNLIKAR KGHADALSDD AQLVDSGLLP GFEALPTVVL VLDKRTLRVA FANPSAESML 
EMSRRQLTQM AWPDIFANGE ELTATIAAIA AHRFHATHLD AVLERPGHEP LHVHAVVGFL
ESAQDYVLLE LFENERHLRS DREERIHDLT AVNKQLIRNL AHEIKNPLGG IRGAAQLLEF
ELGERERDEL REYTQVVIKE SDRLQTLVDR LLEPHRHPHI VGDVNIHEVC ERVRAVILAE
FPRGLTIERD YDVSVPDLRG DKEQLIQALL NIVRNAAEAL RERISQGDAR IELRTRVARK
VTIAKRLCKL ALDLHIVDNG PGIPEDIRER IFYPLVSGRE DGSGLGLTLA QTFVQQHEGM
IEVESRPGHT EFQILLPLDV