| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1427 |
|---|
| Symbol | |
|---|
| ID | 6242918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1607620 |
|---|
| End bp | 1608528 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642593210 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_001857655 |
|---|
| Protein GI | 186476185 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.544407 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAACG GCACTCAGCA AGACGGCGTC GCGATTCGCG GCAGCATTCC CGCCATCATC
ACTCCGATGC TCGAAGACGG CAGTCTCGAT CTGCCGGCGT TCCGCAAACT GGTGGACTGG
CACATCGAAG AGGGTACGAA CGCGCTGGTC GTAGTCGGTA CGAGCGGCGA GTCGGCGACG
CTGTCGGTCG ATGAACACGT CCTGATGGTC AAGACGGCCG TCGAGCACGC GGCGGGCCGC
ATCCCCGTGA TCGCGGGCGC CGGTGCCAAC TCGACCACGG AAGCAATCGA GTTGACCGAG
CAGGCGAAGA AAGTGGGCGC CGACGCCACG CTGCAGGTCG TGCCGTACTA CAACAAGCCC
ACCCAGGAAG GCATCTATCG CCATTTCGCG AAGATTGCCG AAGCCGTCGA TCTTCCCGTG
ATCCTGTACA ACGTGCCGGG CCGCACGGTC GCGGATATGT CGAACGAGAC GATCCTGCGC
CTCGCCAACG TGCCTGGCAT CATCGGCGTG AAGGAGGCGA CGGGCAACAT CGACCGCGCC
GCGCATCTGA TCAAGTCGGC GCCCGCGCAT TTCGGCATTT ACAGCGGGGA CGATCCCACC
GCGATCGCGC TGATGCTGCT GGGCGGTCAC GGCAATATCT CGGTGACGGC GAACGTCGCG
CCGCGTCTGA TGAGCGAGCT GTGCAAAGCG GCGCTGGCCG CCGACGCGAA GACGGCACGC
GAAATTCACC TGAAACTGCT CTCGCTGCAC AAGAACCTCT TCATCGAATC GAACCCGATT
CCCGCGAAGT GGGCGTTGCA GCAACTGGGC CGCATCAAGG GCGGCATCCG TCTGCCTCTG
ACGCCGCTTG ACGCGCGTTA CCACGACGTG GTCCGCGCTG CGCTGCGCGA GGCAGGGCTG
CTCGGCTGA
|
|---|
| Protein sequence | MANGTQQDGV AIRGSIPAII TPMLEDGSLD LPAFRKLVDW HIEEGTNALV VVGTSGESAT
LSVDEHVLMV KTAVEHAAGR IPVIAGAGAN STTEAIELTE QAKKVGADAT LQVVPYYNKP
TQEGIYRHFA KIAEAVDLPV ILYNVPGRTV ADMSNETILR LANVPGIIGV KEATGNIDRA
AHLIKSAPAH FGIYSGDDPT AIALMLLGGH GNISVTANVA PRLMSELCKA ALAADAKTAR
EIHLKLLSLH KNLFIESNPI PAKWALQQLG RIKGGIRLPL TPLDARYHDV VRAALREAGL
LG
|
|---|
| |