| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1338 |
|---|
| Symbol | rpsB |
|---|
| ID | 6242829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1497671 |
|---|
| End bp | 1498423 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642593115 |
|---|
| Product | 30S ribosomal protein S2 |
|---|
| Protein accession | YP_001857566 |
|---|
| Protein GI | 186476096 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.21078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTTA CCATGCGTCA GATGCTGGAA GCCGGTGTCC ACTTCGGTCA CCAGACGCGC
TTCTGGAACC CCAAGATGGC CCCCTTCATT TTCGGCCATC GCAACAAGAT TCACATCATC
AACCTCGAAA AGACGCTGCC GATGTACAAC GACGCGCTGA AGTACGTGCG TCAACTGGCA
GCGAACCGCG GCACGATCCT GTTCGTCGGC ACGAAGCGTC AGTCGCGCGA CACGATCGCC
GAAGCAGCGC AGCGCGCAGG CATGCCGTAC GTCAATGCAC GCTGGCTGGG CGGCATGCTG
ACCAACTTCA AGACGCTGAA GGTTTCGATC AAGCGCCTGA AGGACATGGA GGCGGCTGTC
GAGGCAGGCG AGCTCGAGAA GATGAGCAAG AAGGAAGCGC TGCTGTTCGA GCGCGAAATC
GCCAAACTGC AAAAGTCGAT CGGCGGCGTG AAGGACATGG GCGGCATCCC TGACGCGATT
TTCGTCGTCG ACGTCGGCTA TCACAAGATT GCCGTGACGG AAGCGAACAA GCTGGGTGTG
CCCGTCATCG CCGTGGTCGA CACGAACCAC TCGCCGGAAG GTGTGGATTA CGTGATTCCG
GGCAACGACG ACGCAAGCAA GGCTGTCGCG CTGTACACGC AGGGCGTGGC TGACGCGATC
CTCGAAGGCC GTGCTAACGC GGTCAACGAA GTCGTGCAGG CTGTCCGCGG TGGCGACGGC
GATGAGTTCG TCGAGGTCAA CGGGGAAGCG TAA
|
|---|
| Protein sequence | MAVTMRQMLE AGVHFGHQTR FWNPKMAPFI FGHRNKIHII NLEKTLPMYN DALKYVRQLA
ANRGTILFVG TKRQSRDTIA EAAQRAGMPY VNARWLGGML TNFKTLKVSI KRLKDMEAAV
EAGELEKMSK KEALLFEREI AKLQKSIGGV KDMGGIPDAI FVVDVGYHKI AVTEANKLGV
PVIAVVDTNH SPEGVDYVIP GNDDASKAVA LYTQGVADAI LEGRANAVNE VVQAVRGGDG
DEFVEVNGEA
|
|---|
| |