| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1226 |
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| Symbol | |
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| ID | 6242718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1373764 |
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| End bp | 1375059 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642593004 |
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| Product | major facilitator superfamily metabolite/H(+) symporter |
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| Protein accession | YP_001857455 |
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| Protein GI | 186475985 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.142767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA CGACCGTCTT CACGCCCTCC GACACCCGTC GACGCATCTT CGCGATCGTC
GGCGCTTCGT CCGGCAATCT CGTCGAGTGG TTCGATTTCT ACGTCTACTC GTTTTGCGCA
CTGTACTTCG CACCCGCGTT TTTCCCGAAA GGCGATACGA CAGCGCAGTT GCTGAATACG
GCAGGCGTGT TCGCCGCGGG CTTCCTGATG CGCCCGATCG GCGGCTGGTT CTTCGGCCGT
CTCGCCGACA AGCGCGGCCG CCGTTTCGCG ATGATGGTGT CTGTATTCAT GATGTGCGGC
GGTTCGCTCG TGATTGCCGC GTTGCCCACT TATGCGCAGA TCGGCGCGCT CGCGCCTGCG
TTGCTGCTGG TCGCGCGTCT GTTTCAGGGC CTGTCGGTGG GCGGCGAATA TGGCACCAGC
GCAACGTACA TGAGTGAAGT CGCGTTGAAG GGGCGTCGCG GCTTCTTCGC GTCGTTCCAG
TACGTGACGC TGATCGGCGG GCAACTGTTC GCGTTGCTCG TGCTCGTGAT CCTGCAACAG
CTGCTGACGA CGGAAGAGCT GAAGGCGTGG GGCTGGCGTA TTCCGTTCGT GGTCGGCGCG
CTGGCCGCGC TGGTCGCGCT GTATCTGCGC CGCTCGCTCG ACGAAACGAC CACGGCCGAG
ACGCGTCAGC GCAAGGAAGC GGGCACGCTG CGCGGCATGT GGAAGCACAA GGGCGCTTTC
TTCACGGTGC TCGGCTTTAC GGCGGGCGGT TCGCTGATTT TCTACACGTT TACGACGTAC
ATGCAGAAGT ATCTCGTCAA CACAGCAGGC ATGAACACGA AGACTGCCAG CAACGTGATG
ACGGCTGCGC TCTTCGTGTA CATGATCATG CAGCCGGTGT TCGGTGCCTT GTCGGATCGT
ATCGGCCGCC GCCAGTCTAT GCTGCTGTTC GGCTTCTTCG CGACGATCAG CACGGTGCCG
CTGCTGCACG CCCTGAAGGA CGTGACAAGC CCCGTGATGG CCTTCGTGTT CGTGGTGATC
GCGCTGGCCA TTGTCAGCTT CTATACGTCG ATCAGCGGCC TGATCAAGGC CGAAATGTTC
CCACCTGAAG TGCGCGCGCT GGGCGTCGGC CTGTCGTACG CGGTGGCGAA TGCGATCTTC
GGCGGGTCGG CGGAGTACGT GGCGCTGTGG CTCAAGCAGG CCGGCAGCGA ATCGATGTTC
TACTGGTACG TGACGGCGCT GTGTGCGATC GCCGGCCTCG TATCGTTCCG CATGCGCGAT
CCGTCAAAGG AAGGCTATCT GCGCAACGAA CCGTGA
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| Protein sequence | MTDTTVFTPS DTRRRIFAIV GASSGNLVEW FDFYVYSFCA LYFAPAFFPK GDTTAQLLNT
AGVFAAGFLM RPIGGWFFGR LADKRGRRFA MMVSVFMMCG GSLVIAALPT YAQIGALAPA
LLLVARLFQG LSVGGEYGTS ATYMSEVALK GRRGFFASFQ YVTLIGGQLF ALLVLVILQQ
LLTTEELKAW GWRIPFVVGA LAALVALYLR RSLDETTTAE TRQRKEAGTL RGMWKHKGAF
FTVLGFTAGG SLIFYTFTTY MQKYLVNTAG MNTKTASNVM TAALFVYMIM QPVFGALSDR
IGRRQSMLLF GFFATISTVP LLHALKDVTS PVMAFVFVVI ALAIVSFYTS ISGLIKAEMF
PPEVRALGVG LSYAVANAIF GGSAEYVALW LKQAGSESMF YWYVTALCAI AGLVSFRMRD
PSKEGYLRNE P
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