| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1012 |
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| Symbol | clpX |
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| ID | 6242510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 1134547 |
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| End bp | 1135818 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642592789 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001857247 |
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| Protein GI | 186475777 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00708738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.963752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA AGAAAGGTTC GAACAGCGAG AAGCTGTTGT ATTGCTCGTT CTGCGGCAAA
AGTCAGCACG AGGTTAAGAA ACTGATTGCT GGCCCGTCGG TATTCATCTG CGATGAATGT
ATCGACCTGT GCAACGAAAT CATTCGCGAC GAAGCAGCGG GCGCGGGTCT GGAAACGGGC
CTGTCCAAGT CCGATCTGCC GAGTCCTCAA GAAATTCGCG ACATTCTCGA TCAATACGTG
ATCGGGCAAG AGCGCGCGAA GAAAATTCTC GCGGTCGCGG TGTACAACCA CTACAAGCGT
CTGAAACATC TCGACAAGAA GGACGATGTC GAGTTGTCGA AGAGCAACAT CCTGCTGATC
GGCCCGACGG GCTCCGGCAA GACGCTGCTC GCGCAGACCC TTGCGCGCCT TCTGAACGTG
CCGTTCGTGA TCGCCGACGC GACCACGCTG ACGGAAGCCG GCTATGTCGG CGAAGACGTC
GAGAACATCA TTCAGAAGCT GCTGCAAAAC TGCAATTACG AAGTCGACAA GGCGCAGCGC
GGTATCGTCT ATATCGACGA AATCGACAAG ATCAGCCGCA AGTCGGACAA CCCGTCGATC
ACCCGCGACG TGTCGGGCGA GGGCGTCCAG CAGGCTCTGC TGAAGCTTGT CGAAGGAACG
ATGGCGTCGG TGCCGCCGCA AGGCGGTCGT AAGCATCCGA ACCAGGATTT CATCCAGGTC
GATACGACCA ATATCCTGTT CATCTGTGGC GGTGCGTTCG ATGGCCTCGA AAAGGTGATC
GTCGATCGTA CGGAAAAGAC GGGCATCGGC TTCGGCGCGA GCGTCAAGAG CAAGCAGGAT
CGTGACGCAG GCGAAGTGCT GCGCGAAGTC GAACCAGAAG ATCTCATCAA ATTCGGCCTG
ATTCCAGAAC TGATCGGACG TTTGCCCGTC GTGGCGACGC TCGGCAAGCT GGACGAAACC
GCGTTGATGA AGATTCTGGT CGAACCAAAG AATGCACTCG TCAAGCAGTA TCACAAGCTG
TTCAACATGG AACGCGTCGA GCTGGAGATT CGTCCCGCCG CGCTGCAAGC CATTGCCCGC
AAGGCTATCC GTCGCAAGAC GGGGGCACGC GGCTTGCGGT CCATCCTGGA ACAGGCATTG
CTTGACGTAA TGTATGAATT GCCGGCAATG AAGGGCGTGA GCAAAGTCAT TATTGACGAC
AATGTCATTG ATGGCGACGG AAAGCCTTTA CTGATCTACG AGGACGCGCC AAAGGTGGCG
GGTTCGAATT GA
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| Protein sequence | MADKKGSNSE KLLYCSFCGK SQHEVKKLIA GPSVFICDEC IDLCNEIIRD EAAGAGLETG
LSKSDLPSPQ EIRDILDQYV IGQERAKKIL AVAVYNHYKR LKHLDKKDDV ELSKSNILLI
GPTGSGKTLL AQTLARLLNV PFVIADATTL TEAGYVGEDV ENIIQKLLQN CNYEVDKAQR
GIVYIDEIDK ISRKSDNPSI TRDVSGEGVQ QALLKLVEGT MASVPPQGGR KHPNQDFIQV
DTTNILFICG GAFDGLEKVI VDRTEKTGIG FGASVKSKQD RDAGEVLREV EPEDLIKFGL
IPELIGRLPV VATLGKLDET ALMKILVEPK NALVKQYHKL FNMERVELEI RPAALQAIAR
KAIRRKTGAR GLRSILEQAL LDVMYELPAM KGVSKVIIDD NVIDGDGKPL LIYEDAPKVA
GSN
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