Gene Bphy_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0888 
Symbol 
ID6242386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp992153 
End bp993466 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content60% 
IMG OID642592662 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001857123 
Protein GI186475653 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR02966] phosphate regulon sensor kinase PhoR 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0308892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA TCTGGGCACG TTCCCTGGTA TCGCTTGTGC TCCTCGCTGT GCTGTGCGTG 
GCAATCGGCA TCTTCGTCAA CACGAAAACG GCGTTGGCGC TCGCCGTGCT CGCACTGCTC
GCGCAAGGCA TTTTCAGCAC GTTCCACAAG CAACGCCTGT GGCGTCTGCT CGACGCGCCT
GTGTATGGCG AAGTGCCGAG CGCACCCGGC ATCTGGGGCG AAATTTACTA CAGGCTGCAC
AAGCTCGCGA AACGCTGGCA CGCACAGGTG CGCCAGGTCG AACAGCAGCA TTCGCGTTTC
ATTCAGGCGA TTCAGGCGTC CCCGAACGGC GTTGCGATGC TCGACGATCA CGATCAGATC
GAGTGGTGCA ACGCGATCTC CGAAGCGCAT TTCGGCCTCG ACGCGAAACG CGATTTACGT
CAGCACATCA CACATCTCGT GCGTCATCCC GACTTCGTGC GCTATCTGAA TTCGCATCAT
TATGAACAGA TGCTGATCAT GCGCGGGATG GGCGACAAGC GGCAGAACGT GCTGTCCGTG
CAGGTGTTTC CGTATGGCGA GAACCGCAAG CTGGTGCTGT CGCAGGACAT TACGGAACTG
GAACGCACGG ATGCGATGCG CCGGGACTTC GTGGCGAATG TATCGCACGA ACTAAAGACG
CCGTTGACCG TGCTGTCGGG TTTTCTCGAA ACGATGCGAG AGATCCCACT CGACGAGAGC
GAGCGCGTGC GCTATCTCGA TCTGATGATG CAGCAGGCGC AGCGGATGCA GCATATCGTC
AGCGATCTGC TGGTGCTCGC GACGCTCGAA GGCGACAACA AGCCGCCGAG CAACCAGATG
GTCGATATGC GCGCGGTGCT ACGGCATCTG GAAGATGATG CGCAAAGCCT CTCGGGCGGA
CGACACCGGA TTGGCTTCGA GGCCGACGAG GCATTGACGG TGACGGGAGT GGAGACGGAG
ATCATGAGCG CGTTCGGGAA TCTCGTCACG AATGCGATTC GGTATACACC TGACGGCGGG
TCGATCGATG TGAGTTGGCA CGCACAGGGA GGGCAAGCCA CGTTCGCAGT GACCGACAGC
GGCTTGGGTA TTCCTGCCGC GGATATTCCG CGATTGACTG AGCGGTTTTA TCGTGTCGAT
CGGAGCCGGT CTCGCGACAC GGGCGGGACC GGGCTTGGGC TTGCGATCGT CAAGCATGTG
TTGCAGCGGC ATGATGCGCA GCTCGAGGTG AAAAGCGAAG AAGGGCGAGG GAGCACTTTT
ACCGTACGGT TTCCCGTTGC GCGGAGTGCG CGGCTTCAGT CGACCGCCGC TTGA
 
Protein sequence
MNIIWARSLV SLVLLAVLCV AIGIFVNTKT ALALAVLALL AQGIFSTFHK QRLWRLLDAP 
VYGEVPSAPG IWGEIYYRLH KLAKRWHAQV RQVEQQHSRF IQAIQASPNG VAMLDDHDQI
EWCNAISEAH FGLDAKRDLR QHITHLVRHP DFVRYLNSHH YEQMLIMRGM GDKRQNVLSV
QVFPYGENRK LVLSQDITEL ERTDAMRRDF VANVSHELKT PLTVLSGFLE TMREIPLDES
ERVRYLDLMM QQAQRMQHIV SDLLVLATLE GDNKPPSNQM VDMRAVLRHL EDDAQSLSGG
RHRIGFEADE ALTVTGVETE IMSAFGNLVT NAIRYTPDGG SIDVSWHAQG GQATFAVTDS
GLGIPAADIP RLTERFYRVD RSRSRDTGGT GLGLAIVKHV LQRHDAQLEV KSEEGRGSTF
TVRFPVARSA RLQSTAA