| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0868 |
|---|
| Symbol | |
|---|
| ID | 6242366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 968586 |
|---|
| End bp | 969032 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642592642 |
|---|
| Product | ribonuclease H |
|---|
| Protein accession | YP_001857103 |
|---|
| Protein GI | 186475633 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0328] Ribonuclease HI |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.243727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.451951 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCTG ATCTGATCGA AATCTTCACC GACGGCGCCT GCAAGGGCAA TCCGGGGCCC
GGCGGCTGGG GCGCGCTATT GCGCTACGGC ACGCAGGAAA AGGAATTGTT CGGCGGTGAA
GCGAACACAA CCAACAACAG AATGGAACTG ATGGCCGTGA TCGCTGCGCT CGAGGCGCTG
AAGCGTCCAT GCAAGGCCGT CGTGCACACC GATTCGCAAT ACGTGCAGAA AGGCATCAGC
GAATGGATCC ACGGCTGGAA GAAAAAAGGC TGGGTAACGG CGGCGAGGGC GCCCGTGAAA
AACGCCGATC TCTGGAAGCG GCTCGACGCG CTCACGCAGC AGCATCAGCT CGAGTGGCGC
TGGGTCAAGG GACACGCGGG GCATCCGGAG AACGAGCGCG CGGATGCGCT AGCCAATCGC
GGCGTGGCTT CGCTGGCAGA TCTCTGA
|
|---|
| Protein sequence | MSSDLIEIFT DGACKGNPGP GGWGALLRYG TQEKELFGGE ANTTNNRMEL MAVIAALEAL
KRPCKAVVHT DSQYVQKGIS EWIHGWKKKG WVTAARAPVK NADLWKRLDA LTQQHQLEWR
WVKGHAGHPE NERADALANR GVASLADL
|
|---|
| |