Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0851 |
Symbol | uvrC |
ID | 6242349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 949920 |
End bp | 952142 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642592621 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001857086 |
Protein GI | 186475616 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00444649 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAT CCGATTCCCC CCGCACCGCC GATCCCGCCG CGAATCAGGC CGCGAGTCAG GCCGCGAAGC AGGCCGCGAA GACTGACGTG AGCGCAGCCG TCGCTGAAGA GTTCGACCCG AAAAAGGTGT TGCGGCAGCT GCCGCACATG CCCGGCGTCT ATCGTTACTA CGACGAGCAG GGCGCCGTGC TATACGTGGG CAAGGCGCGC GACTTGAAGA AGCGCGTGTC GAGCTACTTC ACGAAGACGC TGCTGTCGCC GCGCATCGCG ATGATGGTCT CGCGCATCGC GAAGATCGAA ACGACGGTCA CGCGTTCGGA AGCGGAAGCG CTGTTGCTCG AGAACAATCT GATTAAGGCG TTGGCGCCGC GCTACAACAT CCTATTTCGC GACGACAAGT CATATCCGTA CCTCAAACTG ACAGGCCACC AGTTTCCGCG TATGGCGTAT TACCGCGGTT CGGTCGACAA GAAGAATCAG TATTTCGGAC CGTTTCCGAG CGCGTGGGCT GTGCGTGAGA GCATTCAGAT CCTGCAGCGC GTGTTTCAGT TGCGCACTTG CGAAGACTCT GTATTCAACA ACCGCACGCG CCCGTGTCTG TTGCATCAGA TTGGACGATG CACGGCGCCG TGCGTCGGTG CCGTCACAGA AGAGGACTAC GCGCGCGATG TTTCCAATGC TTCGCGCTTC CTCCTCGGAC GTCAGTCGGA AGTGATGAAA GAACTTGAGC AGAAGATGCA CGCATTCGCC AGCGAACTGA AGTTCGAGCA AGCGGCCGCG GTGCGCAATC AGATGAGTTC GCTATCGACG GTGCTGCATC AGCAGGCGAT CGAAGTCGGC GGCGATAGCG ATGTCGACAT CCTTGCCGTC GTCGCGCTAG GCGGGCGCGT GTGCGTGAAT CTCGCGATGG TGCGTGGCGG CCGGCATCTC GGCGACAAGG CTTACTTCCC AACGCATGTC GAGAGCGCAT TGACGGCGGA TGAGGGCGGT ATCGAAGACG GCGATGTTCT GCTATCGGCC GAAACCGCAT CGGTGATCGA CGTCGAGGCG GAACTGGGCG ACGAGTCCGA GGACGCACTG AGCATCGACG AAGCCGCGTC GGAAGAAAGC GCGCCGGAAG AAAGCGATTC CGAAGATGTT GCCGAGGATG CAGACAAGAA GCCGCGCCGC GCACACGGGA TCGAATCCGA AGTACTCGAA GCATTCATCG CGCAGCATTA CCTCGGCAAT CGGGTGCCGC CCGTGCTCGT GGTCAGCCAT GCGCCCGCAA GCCGGGAACT CGTCGATTTG CTGATCGAGC AGGCCGGGCA TAAGGTCACG CTGCTGCGGC AGCCGCAGGG CCAGAAGCGG GCGTGGCTCG CGATGGCCGA GCAGAATGCG AAAATCGCGC TCGCGCGGTT GCTGTCCGAA CAAGGTTCGC AGCAGTCACG CACGCGTTCG CTCGCTAACA CGCTGTCGAT GGAATGCGAA GACCTCGCCC ATCTGCGCAT CGAGTGCTTC GACATCAGCC ATACGATGGG CGAAGCGACG CAGGCATCGT GCGTGGTGTT TCACCATCAC AAGATGCAGT CGTCCGAATA CCGGCGCTAC AACATCACGG GCATCACGCC CGGCGACGAC TACGCGGCGA TGCGTCAGGT GCTCACGCGC CGCTACGAGA AGATGGTCGC GCAGGCCGCG GCGAACGCGA ACGACGAGGC GGCCGAATTG CAGCCCGAAG CGGCCGCCGA TCCCGCCGCC GCGCCCGAAG GCGCGGAACC TGTCGCTGCG GGCGGGCAGT TGCCGAACAT CGTGTTGATC GACGGCGGCA AAGGGCAGGT CGAGATTGCG CGCCAGGTGT TCAATGAGCT TGGGCTGGAC CTCGGCATGC TGGTCGGTGT CGCAAAGGGC GAGGGCCGCA AGGTCGGGCT GGAAACGCTC GTGTTCGCGG ACGGCCGGCC GTCGCTCGAA CTCGGCAAGG AAAGTGCGGC GCTGATGCTC GTCGCGCAGA TCCGCGATGA AGCACACCGC TTCGCGATCA CCGGCATGCG CGCGAAGCGC GGCAAAACGC GGCAGACGTC GCGGCTCGAG GAACTGGAAG GCGTTGGCGC CAAGCGACGT CAGCGCTTGC TCGCGCGCTT CGGCGGCTTG CGCGGCGTCG TGGCGGCGAG TATCGACGAT CTTGCGAGTG TCGAAGGCAT CTCGCGTGCG CTCGCCGAAC AGATTTACCG TCAGTTGCAT TGA
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Protein sequence | MTRSDSPRTA DPAANQAASQ AAKQAAKTDV SAAVAEEFDP KKVLRQLPHM PGVYRYYDEQ GAVLYVGKAR DLKKRVSSYF TKTLLSPRIA MMVSRIAKIE TTVTRSEAEA LLLENNLIKA LAPRYNILFR DDKSYPYLKL TGHQFPRMAY YRGSVDKKNQ YFGPFPSAWA VRESIQILQR VFQLRTCEDS VFNNRTRPCL LHQIGRCTAP CVGAVTEEDY ARDVSNASRF LLGRQSEVMK ELEQKMHAFA SELKFEQAAA VRNQMSSLST VLHQQAIEVG GDSDVDILAV VALGGRVCVN LAMVRGGRHL GDKAYFPTHV ESALTADEGG IEDGDVLLSA ETASVIDVEA ELGDESEDAL SIDEAASEES APEESDSEDV AEDADKKPRR AHGIESEVLE AFIAQHYLGN RVPPVLVVSH APASRELVDL LIEQAGHKVT LLRQPQGQKR AWLAMAEQNA KIALARLLSE QGSQQSRTRS LANTLSMECE DLAHLRIECF DISHTMGEAT QASCVVFHHH KMQSSEYRRY NITGITPGDD YAAMRQVLTR RYEKMVAQAA ANANDEAAEL QPEAAADPAA APEGAEPVAA GGQLPNIVLI DGGKGQVEIA RQVFNELGLD LGMLVGVAKG EGRKVGLETL VFADGRPSLE LGKESAALML VAQIRDEAHR FAITGMRAKR GKTRQTSRLE ELEGVGAKRR QRLLARFGGL RGVVAASIDD LASVEGISRA LAEQIYRQLH
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