Gene Bphy_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0851 
SymboluvrC 
ID6242349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp949920 
End bp952142 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content63% 
IMG OID642592621 
Productexcinuclease ABC subunit C 
Protein accessionYP_001857086 
Protein GI186475616 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00444649 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAT CCGATTCCCC CCGCACCGCC GATCCCGCCG CGAATCAGGC CGCGAGTCAG 
GCCGCGAAGC AGGCCGCGAA GACTGACGTG AGCGCAGCCG TCGCTGAAGA GTTCGACCCG
AAAAAGGTGT TGCGGCAGCT GCCGCACATG CCCGGCGTCT ATCGTTACTA CGACGAGCAG
GGCGCCGTGC TATACGTGGG CAAGGCGCGC GACTTGAAGA AGCGCGTGTC GAGCTACTTC
ACGAAGACGC TGCTGTCGCC GCGCATCGCG ATGATGGTCT CGCGCATCGC GAAGATCGAA
ACGACGGTCA CGCGTTCGGA AGCGGAAGCG CTGTTGCTCG AGAACAATCT GATTAAGGCG
TTGGCGCCGC GCTACAACAT CCTATTTCGC GACGACAAGT CATATCCGTA CCTCAAACTG
ACAGGCCACC AGTTTCCGCG TATGGCGTAT TACCGCGGTT CGGTCGACAA GAAGAATCAG
TATTTCGGAC CGTTTCCGAG CGCGTGGGCT GTGCGTGAGA GCATTCAGAT CCTGCAGCGC
GTGTTTCAGT TGCGCACTTG CGAAGACTCT GTATTCAACA ACCGCACGCG CCCGTGTCTG
TTGCATCAGA TTGGACGATG CACGGCGCCG TGCGTCGGTG CCGTCACAGA AGAGGACTAC
GCGCGCGATG TTTCCAATGC TTCGCGCTTC CTCCTCGGAC GTCAGTCGGA AGTGATGAAA
GAACTTGAGC AGAAGATGCA CGCATTCGCC AGCGAACTGA AGTTCGAGCA AGCGGCCGCG
GTGCGCAATC AGATGAGTTC GCTATCGACG GTGCTGCATC AGCAGGCGAT CGAAGTCGGC
GGCGATAGCG ATGTCGACAT CCTTGCCGTC GTCGCGCTAG GCGGGCGCGT GTGCGTGAAT
CTCGCGATGG TGCGTGGCGG CCGGCATCTC GGCGACAAGG CTTACTTCCC AACGCATGTC
GAGAGCGCAT TGACGGCGGA TGAGGGCGGT ATCGAAGACG GCGATGTTCT GCTATCGGCC
GAAACCGCAT CGGTGATCGA CGTCGAGGCG GAACTGGGCG ACGAGTCCGA GGACGCACTG
AGCATCGACG AAGCCGCGTC GGAAGAAAGC GCGCCGGAAG AAAGCGATTC CGAAGATGTT
GCCGAGGATG CAGACAAGAA GCCGCGCCGC GCACACGGGA TCGAATCCGA AGTACTCGAA
GCATTCATCG CGCAGCATTA CCTCGGCAAT CGGGTGCCGC CCGTGCTCGT GGTCAGCCAT
GCGCCCGCAA GCCGGGAACT CGTCGATTTG CTGATCGAGC AGGCCGGGCA TAAGGTCACG
CTGCTGCGGC AGCCGCAGGG CCAGAAGCGG GCGTGGCTCG CGATGGCCGA GCAGAATGCG
AAAATCGCGC TCGCGCGGTT GCTGTCCGAA CAAGGTTCGC AGCAGTCACG CACGCGTTCG
CTCGCTAACA CGCTGTCGAT GGAATGCGAA GACCTCGCCC ATCTGCGCAT CGAGTGCTTC
GACATCAGCC ATACGATGGG CGAAGCGACG CAGGCATCGT GCGTGGTGTT TCACCATCAC
AAGATGCAGT CGTCCGAATA CCGGCGCTAC AACATCACGG GCATCACGCC CGGCGACGAC
TACGCGGCGA TGCGTCAGGT GCTCACGCGC CGCTACGAGA AGATGGTCGC GCAGGCCGCG
GCGAACGCGA ACGACGAGGC GGCCGAATTG CAGCCCGAAG CGGCCGCCGA TCCCGCCGCC
GCGCCCGAAG GCGCGGAACC TGTCGCTGCG GGCGGGCAGT TGCCGAACAT CGTGTTGATC
GACGGCGGCA AAGGGCAGGT CGAGATTGCG CGCCAGGTGT TCAATGAGCT TGGGCTGGAC
CTCGGCATGC TGGTCGGTGT CGCAAAGGGC GAGGGCCGCA AGGTCGGGCT GGAAACGCTC
GTGTTCGCGG ACGGCCGGCC GTCGCTCGAA CTCGGCAAGG AAAGTGCGGC GCTGATGCTC
GTCGCGCAGA TCCGCGATGA AGCACACCGC TTCGCGATCA CCGGCATGCG CGCGAAGCGC
GGCAAAACGC GGCAGACGTC GCGGCTCGAG GAACTGGAAG GCGTTGGCGC CAAGCGACGT
CAGCGCTTGC TCGCGCGCTT CGGCGGCTTG CGCGGCGTCG TGGCGGCGAG TATCGACGAT
CTTGCGAGTG TCGAAGGCAT CTCGCGTGCG CTCGCCGAAC AGATTTACCG TCAGTTGCAT
TGA
 
Protein sequence
MTRSDSPRTA DPAANQAASQ AAKQAAKTDV SAAVAEEFDP KKVLRQLPHM PGVYRYYDEQ 
GAVLYVGKAR DLKKRVSSYF TKTLLSPRIA MMVSRIAKIE TTVTRSEAEA LLLENNLIKA
LAPRYNILFR DDKSYPYLKL TGHQFPRMAY YRGSVDKKNQ YFGPFPSAWA VRESIQILQR
VFQLRTCEDS VFNNRTRPCL LHQIGRCTAP CVGAVTEEDY ARDVSNASRF LLGRQSEVMK
ELEQKMHAFA SELKFEQAAA VRNQMSSLST VLHQQAIEVG GDSDVDILAV VALGGRVCVN
LAMVRGGRHL GDKAYFPTHV ESALTADEGG IEDGDVLLSA ETASVIDVEA ELGDESEDAL
SIDEAASEES APEESDSEDV AEDADKKPRR AHGIESEVLE AFIAQHYLGN RVPPVLVVSH
APASRELVDL LIEQAGHKVT LLRQPQGQKR AWLAMAEQNA KIALARLLSE QGSQQSRTRS
LANTLSMECE DLAHLRIECF DISHTMGEAT QASCVVFHHH KMQSSEYRRY NITGITPGDD
YAAMRQVLTR RYEKMVAQAA ANANDEAAEL QPEAAADPAA APEGAEPVAA GGQLPNIVLI
DGGKGQVEIA RQVFNELGLD LGMLVGVAKG EGRKVGLETL VFADGRPSLE LGKESAALML
VAQIRDEAHR FAITGMRAKR GKTRQTSRLE ELEGVGAKRR QRLLARFGGL RGVVAASIDD
LASVEGISRA LAEQIYRQLH