| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0639 |
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| Symbol | |
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| ID | 6242138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 719663 |
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| End bp | 721291 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642592403 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001856875 |
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| Protein GI | 186475405 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGGTG ATTGGCAGAA TTCCCAGGCC AAAGTTGATC GTTATTCATC CGCCGTCTCC
CAGTATGGCA ACGCACGCTT CGATGCCGCG CTCGCACTGC TCGAACCGCT GCTGACATCG
CATACCGCCG ATGCGCACGT TTTCAATCTG GCCGCCGCGT GCTGCCTGTC GCTGGATCGT
TTGGACCATG CGGAGATCTA CTGGCGGCGA GCAATCGCAC TGAAGCCCGA TTACTGCGAC
GCGCACAACA ACCTCGGCGT CGTGCTGAAA GAGTCGGGCC GCCTGGACGA AGCAAAGGCC
TGCTATCACA AGGCACTCTC GATTTCGCCG ACACACGCGG GCGCTTACGT GAACCTCGGG
CGGCTCCATG CGCAACTAGG CCGTTCGGAC GAGGCTGAAT CCTGCTATCT GCGCGCGCTG
GAACTTCAGC CCGGCGACGG CGATGTCTAC GTGAATCTTG GCGTGCTGTA TCAGGAGCAA
ATGCGCTTGC GTGAAGCCGA GGCCGCGTAC AAGAGCGCGA TTGCCGCCAA TCCGCGCGAC
GCCAAGGCCC ATTTCAATCT CGGCGTGGTG CTCAAGATGC AGCATCGCTT CGCCGAAGCG
GAAGCGTCGT ACCGGCACAC GCTTGCGCTT CGGCCCGACT ACTTCGAGGT GAAGATCAAC
CTCGCGCATC TGCTGCTCAA CGTGGGTCGC CTGGAGGAGG GATGGGCGCT GTTCGAGACA
CGCTACGAGC GCGCGTGGCC GGCGCGTAAG GTCGCGCCAC CGCCCGTCGA TTTCCCGCTC
TGGCGCGGCG AGCCGCTCGC GGGCAAATCG TTGCTCGTGT GGCCGGAGCA AGGGCACGGA
GACAGTCTGC AATTCTGCCG CTATCTGCCG ATGCTCAAGG CGCTCGGCCT CGCGAAGCTG
AGCCTCGCGT GTTCGCCTGC GTTGCGCAGC CTGCTCGAAA CCATCGAGGG CGTCGACGCA
TGCATTCCAC TCGACGGCGA ACACGATATT CCGAAGCACG ACTACGTGTG CCTGACGATG
AGCCTGCCCC ATCGGCTCGG GACGACGCTT ACGACCATTC CGGCCGGGAC GCCGTATCTG
AGCGTGCCGC CGGCATACGC CGCCCAATGG AAAGGACGGT TGCCAGAAGG CGCGCGCAGG
GTAGGCCTCG TCTGGGCCGG CGATCCACGT CCCGATCAAC CGGCGATCAA CGCTGTCGAC
CGCCGCCGCT CGCTCGACGC GCGCGCGTAT CTCCCGCTGC TGCGCGTGCC GGGCATCACG
TTCATCAGTC TGCAAAAAGG CGCGTTGACG CAGCCGCAAA TCGACACACT ACCGCTGGAA
TTTCGCCCGT TCGATCCGAT GCACGGGGTT CACGAGTTCG CCGACACCGC CGCGATCATC
GAGCAACTCG ACCTCGTGAT TTCCGTCGAT ACCTCCATCG CGCATCTGGC CGGTGCGTTG
AACAGGCCGA CGTGGGTTCT GTCGCGCTAC GACGGCTGCT GGCGCTGGCT ACATGATCGC
GACGACACGC CGTGGTATCC GCGCACGCGT CTGTTCCGTC AGACGCAGCC AGGCGAGTGG
GACGGAGTGA TCGAGCGCGT GAGAATCGCG CTCGAACAAT GGCCGGCTCA CGAACGCGCG
CCGACCTGA
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| Protein sequence | MYGDWQNSQA KVDRYSSAVS QYGNARFDAA LALLEPLLTS HTADAHVFNL AAACCLSLDR
LDHAEIYWRR AIALKPDYCD AHNNLGVVLK ESGRLDEAKA CYHKALSISP THAGAYVNLG
RLHAQLGRSD EAESCYLRAL ELQPGDGDVY VNLGVLYQEQ MRLREAEAAY KSAIAANPRD
AKAHFNLGVV LKMQHRFAEA EASYRHTLAL RPDYFEVKIN LAHLLLNVGR LEEGWALFET
RYERAWPARK VAPPPVDFPL WRGEPLAGKS LLVWPEQGHG DSLQFCRYLP MLKALGLAKL
SLACSPALRS LLETIEGVDA CIPLDGEHDI PKHDYVCLTM SLPHRLGTTL TTIPAGTPYL
SVPPAYAAQW KGRLPEGARR VGLVWAGDPR PDQPAINAVD RRRSLDARAY LPLLRVPGIT
FISLQKGALT QPQIDTLPLE FRPFDPMHGV HEFADTAAII EQLDLVISVD TSIAHLAGAL
NRPTWVLSRY DGCWRWLHDR DDTPWYPRTR LFRQTQPGEW DGVIERVRIA LEQWPAHERA
PT
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