| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0614 |
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| Symbol | |
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| ID | 6242113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 689259 |
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| End bp | 690836 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642592378 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001856850 |
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| Protein GI | 186475380 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.168716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA AAGACCTGCG TGACTTCGCG AGCCGCCTCG AATCGCTCGG GGAGTTGCGC
CGCATCTCGC AACCCGTGTC ACCTGTCCTC GAAATGACCG AACTCTGCGA CCGCGTGCTG
CGCGCAGGCG GCCCCGCGCT GCTGTTCGAG TCGAAGGCGA CGCATGCGTT CCCGGTGCTC
GGCAATCTGT TCGGCACGCC GCGGCGTGTC GCGCTCGGCA TGGGCATCGA CGCGTCCGCG
CCGGGCGGCG CTGGCGGCGA TCAGGCGGCG CTCGAGACGC TGCGCGATGT CGGACGCCTG
CTGTCCGCGC TGAAGGAGCC TGAGCCGCCC AAGGGCCTCA AGGACGCGGG CAAGATGCTG
TCGCTTGCGA AGGCGGTCTG GGACATGGCG CCGAAGACGG TGAGCGCCCC GCCCTGCCAG
GAAATCGTCT GGGAAGGCAA TGACGTCGAT CTCGCGAAGC TGCCCATCCA GACCTGTTGG
CCGGGCGACG CTGGCCCGTT GATTACCTGG GGCCTCACGG TCACGCGCGG ACCGAACAAG
ACGCGGCAGA ACCTGGGCAT CTACCGGCAG CAGGTGATCG GACGTAACAA GGTCATCATG
CGCTGGCTTG CACATCGCGG CGGCGCGCTC GACTTCCGCG AGTTCGCATT GAAGAACCCC
GGCAAGCCGT ATCCCGTCGC GGTCGTTCTG GGCGCCGATC CCGCGACGAT CCTCGGCGCC
GTCACGCCCG TGCCCGATAC GCTGTCGGAA TACCAGTTCG CGGGTCTGCT GCGCGGCGGA
CGCACGGAAC TCGCGAAGTG CATCACGCCG GGCGTCGACA CGCTGCAGGT GCCCGCGCGC
GCGGAGATCG TGCTGGAAGG CTTCATCTAC CCGCAGCAGG GCACGCCGGC ACCCGCGCCC
GAAAGTGCGC CGCCGCGTCC GTCGAAAGGC GCGAGCGCGG CGTATGAGCA TGCGCTCGAA
GGTCCGTACG GCGATCACAC TGGCTACTAC AACGAGCAGG AGTGGTTTCC CGTCTTCACG
ATCGAGCGCA TCACGATGCG CCGCGACGCG ATCTATCACT CCACCTACAC GGGCAAACCG
CCCGACGAGC CGGCCGTGCT GGGCGTCGCG CTGAACGAGG TGTTCGTGCC GCTTCTGCAG
AAGCAGTTCA CGGAGATCAC CGACTTCTAT CTTCCGCCCG AAGGCTGCAG TTACCGGATG
GCCATCGTGC AAATGAAGAA GAGCTATCCG GGCCACGCGA AGCGTGTGAT GTTCGGCGTG
TGGAGCTTTC TGCGGCAGTT CATGTACACG AAGTTCATCG TCGTGGTCGA CGAAGACGTA
AACATCCGCG ACTGGAAGGA AGTGATCTGG GCGATTACGA CGCGTATCGA CCCGTCGCGC
GACACCGTAC TGGTCGATCG CACGCCGATC GACTACCTGG ATTTCGCATC GCCCGTTGCC
GGACTCGGCT CGAAGATGGG ACTCGATGCG ACCAACAAAT GGCCTGGTGA AACCGACCGC
GAATGGGGCC AACCGATCGT GATGGACGAT GCCGTCAAAG CTCGCATCGA CGGTCTGTGG
AACGAACTCG GCCTGTAA
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| Protein sequence | MKYKDLRDFA SRLESLGELR RISQPVSPVL EMTELCDRVL RAGGPALLFE SKATHAFPVL
GNLFGTPRRV ALGMGIDASA PGGAGGDQAA LETLRDVGRL LSALKEPEPP KGLKDAGKML
SLAKAVWDMA PKTVSAPPCQ EIVWEGNDVD LAKLPIQTCW PGDAGPLITW GLTVTRGPNK
TRQNLGIYRQ QVIGRNKVIM RWLAHRGGAL DFREFALKNP GKPYPVAVVL GADPATILGA
VTPVPDTLSE YQFAGLLRGG RTELAKCITP GVDTLQVPAR AEIVLEGFIY PQQGTPAPAP
ESAPPRPSKG ASAAYEHALE GPYGDHTGYY NEQEWFPVFT IERITMRRDA IYHSTYTGKP
PDEPAVLGVA LNEVFVPLLQ KQFTEITDFY LPPEGCSYRM AIVQMKKSYP GHAKRVMFGV
WSFLRQFMYT KFIVVVDEDV NIRDWKEVIW AITTRIDPSR DTVLVDRTPI DYLDFASPVA
GLGSKMGLDA TNKWPGETDR EWGQPIVMDD AVKARIDGLW NELGL
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