Gene Bphy_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0494 
Symbol 
ID6241995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp562070 
End bp563179 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content63% 
IMG OID642592258 
ProductABC transporter related 
Protein accessionYP_001856732 
Protein GI186475262 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0952416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000489409 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCAAGCG TAACGCTGCG CAACATCAGA AAGGCCTACG ACGACAACGA GGTGATGCGC 
AACATCAACC TCGACATCCA GGACGGCGAG TTCGTCGTGT TCGTCGGCCC TAGCGGCTGC
GGCAAGTCCA CGCTAATGCG GATGATTGCC GGCCTCGAAG ACATCTCGGG CGGCGATCTG
CATATCGACG GCACGCGCAT GAACGACGTG CCGCCCGCCA AGCGCGGCAT TGCGATGGTG
TTCCAGTCGT ACGCGCTCTA TCCGCACATG ACGCTGTACG ACAACATGGC ATTCGGCCTG
AAGCTCGCGG GCACGAAGAA ACCGGAGATC GACGCTGCCG TGCGCAATGC CGCGAAGATC
CTGCATATCG ATCACCTGCT CGAGCGCAAG CCGAAGCAGC TGTCGGGTGG CCAGCGGCAG
CGCGTTGCCA TCGGCCGGGC GATCACGCGC AAGCCGAAGG TGTTCCTGTT CGACGAGCCG
CTGTCTAACC TCGACGCCGC GCTGCGCGTG AAGATGCGCC TCGAATTCGC GCGCCTGCAC
GACGAGCTGA AGACCACGAT GATCTACGTG ACGCACGATC AGGTCGAAGC GATGACGCTC
GCGGACAAGA TCGTCGTGCT GTCGGCGGGC AATCTGGAGC AGGTCGGCAG CCCGAACACG
CTGTATCACG CGCCGGCGAA CCGCTTCGTC GCGGGCTTCA TCGGCTCACC GAAGATGAAC
TTTCTCGAAG GTGTCGTGCA GTCGGTGTCG GCGAGCGGCG TTCTCGTCAA ATACGAAACG
GGCGAGACGC AGCTCGTGCT GGTCGAGCCG GGCCGCGCGA AAGAAGGCGA CAAGGTGACG
GTCGGCATTC GCCCGGAGCA TCTGCATATC GACGTGCAGG ACTACGGCGT GTCGGCGCGC
ATCATGGCTG TCGAATCGCT TGGCGATGCG GCGTATCTGT ACGCCGAAAG CAGCGTGGCG
CCCGACGGTC TGATTGCGCG CATTCCGCCG CTCGAACGGC ACGAGAAGGG CGCAACGTTG
CGCCTCGGCG CAACGGCCGA TCATTGCCAT CTGTTCGACA GCGACGGTAG TGCATTCCAG
CGCAAGATCG TCGAGGTGCT GGCGGCCTGA
 
Protein sequence
MASVTLRNIR KAYDDNEVMR NINLDIQDGE FVVFVGPSGC GKSTLMRMIA GLEDISGGDL 
HIDGTRMNDV PPAKRGIAMV FQSYALYPHM TLYDNMAFGL KLAGTKKPEI DAAVRNAAKI
LHIDHLLERK PKQLSGGQRQ RVAIGRAITR KPKVFLFDEP LSNLDAALRV KMRLEFARLH
DELKTTMIYV THDQVEAMTL ADKIVVLSAG NLEQVGSPNT LYHAPANRFV AGFIGSPKMN
FLEGVVQSVS ASGVLVKYET GETQLVLVEP GRAKEGDKVT VGIRPEHLHI DVQDYGVSAR
IMAVESLGDA AYLYAESSVA PDGLIARIPP LERHEKGATL RLGATADHCH LFDSDGSAFQ
RKIVEVLAA