| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0489 |
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| Symbol | |
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| ID | 6241990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 557071 |
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| End bp | 557853 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642592253 |
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| Product | sorbitol dehydrogenase |
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| Protein accession | YP_001856727 |
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| Protein GI | 186475257 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000937678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00159634 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACAGCCC GACTGCAAGG CAAGGTGGCG ATTCTCACGG GCGCGGCGAG CGGTATCGGA
GAGGCGGTGG CCCGGCGGTA TCTGGAAGAG GGCGCGCACT GCGTACTGGT GGACGTGAAG
CCGGCGAGCG ATTTCGCGCA CGCGCTACGC GAATCGGACG GCGATCGCGT GCTGACCCTG
AGCGCAGACG TGACGAAGCG TGACGACATC GGGCGCATCG TTGAGCAAAC GGTGCAGCGT
TTCGGCCAGA TCGATATTCT CTTCAACAAC GCGGCGCTGT TCGACATGCG GCCGCTCCTC
GACGAATCCT GGGACATCTT CGACAAGCTC TTCGCGGTCA ACGTGAAAGG CATGTTCTTT
CTGATGCAGG CCGTCGCGCA GCGCATGGTC GAGCAGGGCC ACGGTGGCAA GATCGTCAAC
ATGTCGTCGC AGGCGGGCCG CCGCGGCGAG GCGCTTGTGT CGCATTACTG CGCGACCAAG
GCTGCCGTGC TCAGTTATAC GCAGTCGGCC GCGCTCGCGC TCGCGCCGCA CCAGATCAAC
GTGAACGGCA TCGCACCGGG CGTCGTCGAT ACGCCAATGT GGGACCAGGT CGATGCGCTC
TTCGCGCGTT ACGAAAACCG GCCGCTCGGC GAGAAGAAGC GTCTCGTCGG TGAAGCGGTG
CCGCTGGGCA GAATGGGACT GCCCGCGGAT CTGACGGGGG CGGCGCTGTT CCTCGCATCG
TCCGATGCGG ATTACATCAC CGCGCAAACC CTGAATGTCG ACGGCGGCAA CTGGATGAGC
TGA
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| Protein sequence | MTARLQGKVA ILTGAASGIG EAVARRYLEE GAHCVLVDVK PASDFAHALR ESDGDRVLTL
SADVTKRDDI GRIVEQTVQR FGQIDILFNN AALFDMRPLL DESWDIFDKL FAVNVKGMFF
LMQAVAQRMV EQGHGGKIVN MSSQAGRRGE ALVSHYCATK AAVLSYTQSA ALALAPHQIN
VNGIAPGVVD TPMWDQVDAL FARYENRPLG EKKRLVGEAV PLGRMGLPAD LTGAALFLAS
SDADYITAQT LNVDGGNWMS
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