| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0448 |
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| Symbol | |
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| ID | 6241949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 509828 |
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| End bp | 511618 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642592212 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001856686 |
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| Protein GI | 186475216 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.134695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCC CCTTTGCACG CTATCTTTCA CTGTTCATAT TGGCTTGTGC GTTGATCCTG
CCTTATGCAG TCGTCAATCA CACGTACCCG ATTCCGACCT TCTACGCCGA GTTCACCGCG
CTAGCGCTCT ATCTGCTGCT GGGCGCGGGT GTGGCGTTGC TCGTGTCGAC CGCCCGGCCG
CGCGTGGCAT TCGCGTCGCC CGTCGTCGCG CTCGTGCCGC TGGGCTTCGG GCTTGTGCTG
ATCGCACAGT CGATCGTGCT GCCCGTGGCG CAGCCGTCGA TGAACTGGCT GGGCGCCGGT
TTCCTGCTCG CTGCGTTCAT GGCGACGCAC GCCGGTTTCG GCTTCAGCCG GGCTGATCTG
ACCGAAACCG TGTTCACAGC GGCGGCCTTT GCGCTGGTCG TCGGCGGGCT TTTTGCGGTC
TTCTGCCAGA CCATCCAGTT GTTCCACCTC GAAGTGAAGG TGACGCCGCT GGTGGTCGCG
TACAGCGTGC TGACCGAGCG CAGGCCGTTC GGCAACATGG CGCAGGCCAA TCACCTCGCC
ACCTATATCG CGTTCGCGAC AGCGGGCGCG ATGTACCTCG TGCAGACTCG CCGCATCAAC
GTGTTCATCT GGCTGCTCGT GTCGGCGATT TTCTCGGGCG GTTTGGCGTT AACGGTCTCG
CGTGGTCCCT GGCTGCAAAT GGGCGTGATC GTCGTCGCGG GTTTCTGGAT GGCATTCGCC
GAGTTGCGCC GTCATCCGTC GCGCCGCGGC AGCAATCGCC AGTGGCTGAT TCCCTTGGTG
CTGGCCGTGC TGTTCTTCGC GGTGAATGCG GCGATCCGAT GGGCGAACCT GCACTATCAC
CTCGATCTCG CTCAGTCCGC TGCGGAACGC ATGAAGGACG CGAGCCAGAT TGCGCCGCGT
CTCGCGCTAT GGAAGTACGG CTGGACGATG TTCCGCACGC ATCCGCTGCT GGGCGTCGGC
TGGGGAGAAT TTCCGCGCTA TCAGTTCGAT CTGGTGAAGT CGCTGGGCGG CGTGGAGATC
GCCAACAACT CGCACGATAT CTTCATCGAT CTGCTCGCGA AGACGGGGCT GATCGGGCTG
GGCCTCGTGC TGCTGGGACT CGGGGCGTGG TTCGTGCGCG TGGTGCGCGC GCCGCACACG
GCGGCGCGCG TGTTCGGTCT CGCACTGATC GGCGTGCTCG TCATGCACGC GCTCGTCGAA
TATCCGCAGC AGTACATGTT CTTCCTGCTG CCGGCGATGT TCGTCATCGG CCTGCTCGAC
ACGAAGCCAC TGCGGTTGAT TCCCGGCGGT CTGTCGTTCG GTGCCTTTCT CGTGATCGTG
CTGGGCGGGC TGGCGGCGCT GTATCCCGTC TATCGCGATT ACGGGCGCTC CGAAGTGCTG
TACTACGGCT CGCGTCCGTT CGACCAGTAT CGCGCGGATC CGTCGTTCCT GTTCGGCGCA
TGGGGCGAGT ACGGGATGGC GACGCTGCTG CCGATGAACG CGCAAGATCT GCCACACAAG
ATGGCCATGC ATCGTCAGGC GATGGCGCTG CTGCCCGGCG AAACGGTGCT GCGCCGCTAT
GCCGTGCTGC AGGCGTTGAG CGGCGACATG AATGGCGCGT TCGATACCGT GGACCGGTTA
AAGATCTTCG CGGAAGAACT GCACGACTGG CCATCGCAGT TGTCGTATCT CTATGATCTG
TGCGACCAGC AGAAGACGCT CGGTGCGTTC AAGGCGGAGC TCATGAAGAA GTACGGCACG
CCGCCCAAGG ACATCAACAA GAGCGATGAG GACGATGACG ACGAGGATTG A
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| Protein sequence | MPTPFARYLS LFILACALIL PYAVVNHTYP IPTFYAEFTA LALYLLLGAG VALLVSTARP
RVAFASPVVA LVPLGFGLVL IAQSIVLPVA QPSMNWLGAG FLLAAFMATH AGFGFSRADL
TETVFTAAAF ALVVGGLFAV FCQTIQLFHL EVKVTPLVVA YSVLTERRPF GNMAQANHLA
TYIAFATAGA MYLVQTRRIN VFIWLLVSAI FSGGLALTVS RGPWLQMGVI VVAGFWMAFA
ELRRHPSRRG SNRQWLIPLV LAVLFFAVNA AIRWANLHYH LDLAQSAAER MKDASQIAPR
LALWKYGWTM FRTHPLLGVG WGEFPRYQFD LVKSLGGVEI ANNSHDIFID LLAKTGLIGL
GLVLLGLGAW FVRVVRAPHT AARVFGLALI GVLVMHALVE YPQQYMFFLL PAMFVIGLLD
TKPLRLIPGG LSFGAFLVIV LGGLAALYPV YRDYGRSEVL YYGSRPFDQY RADPSFLFGA
WGEYGMATLL PMNAQDLPHK MAMHRQAMAL LPGETVLRRY AVLQALSGDM NGAFDTVDRL
KIFAEELHDW PSQLSYLYDL CDQQKTLGAF KAELMKKYGT PPKDINKSDE DDDDED
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