Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0340 |
Symbol | |
ID | 6241842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 384242 |
End bp | 385399 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642592104 |
Product | major facilitator transporter |
Protein accession | YP_001856579 |
Protein GI | 186475109 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC CTGAACTGCG CGCGACCGTG TCGCTCGCCG CAATCTTCGC GCTGCGCATG CTGGGTCTCT TCATGATCAT GCCCGTCTTC TCGATCTACG CGAAGACGAT TCCCGGCGGC GACAACGTAC TGCTGGTCGG CATCGCGCTC GGCGCATACG GCGTGACGCA ATCGCTGCTG TATATCTTCT ATGGCTGGAT TTCCGACAAG GTCGGCCGCA AGCCCGTCAT CGCGACAGGC CTGCTGATCT TCGCGCTCGG CAGTTTCGTC GCCGCATTCG CGCACGATAT GACGTGGATC ATCGTCGGCC GCGTGATTCA GGGGATGGGC GCCGTGTCGT CGGCGGTGAT CGCGTTCATC GCGGATCTGA CAGCGGAGGA GCACCGCACG AAGGCCATGG CGATGGTGGG CGGTTCGATC GGCGTGTCGT TTGCCGTGGC GATCGTCGGC GCGCCGATCG TGTTTCATTG GCTCGGCATG AGCGGACTGT TCGCGCTCGT CGGCATCTTC TCGATCCTGG CTATCGGCGT GGTGCTGTGG GTCGTGCCCG ATGCGCCGAA GCCCGTGCAC GTGCCCGCGC CGTTTCACGA AGTGCTGCAC AACGCGGAAC TGCTGCGCCT GAACTTCGGC GTGCTGGTGC TGCATGCCAC GCAAACCGCG CTGTTTCTTG TCGTGCCGCG CATTCTGGAA GCGGGCGGTC TGCCAGTTTC GTCGCACTGG AAAATTTACC TGCCCGTGAT GGGCCTCGCC TTCGTGATGA TGGTGCCCGC CATCATTGCT GCGGAGAAGC GCGGCAAGAT GAAGGCCGTG CTGCTGAGTG CGATTGGTCT TATCCTGATC GGACAGTTAC TGCTCGCCGT CGCTCCGCAT ACCATTGTGA CTGTGGCCGC GATCCTGTTC GTCTATTTTC TGGGCTTCAA CATTCTGGAA GCGTCGCAGC CTTCGCTGGT ATCGAAGCTG GCTCCCGGCA CCCGCAAGGG CGCGGCGGCC GGCGTGTACA ACACCACGCA GTCCATCGGG CTTGCAATGG GCGGCGTGAT CGGTGGCTGG CTGCTGAAGG TAGACGGTCA GAGTGCCGTT TTCTTTGCGT GCTCAGGGCT GGTGGGATGC TGGCTTATAA TCGCCGCCAG CATGAAACAG CCGCCGCGCA AGGCATAA
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Protein sequence | MSAPELRATV SLAAIFALRM LGLFMIMPVF SIYAKTIPGG DNVLLVGIAL GAYGVTQSLL YIFYGWISDK VGRKPVIATG LLIFALGSFV AAFAHDMTWI IVGRVIQGMG AVSSAVIAFI ADLTAEEHRT KAMAMVGGSI GVSFAVAIVG APIVFHWLGM SGLFALVGIF SILAIGVVLW VVPDAPKPVH VPAPFHEVLH NAELLRLNFG VLVLHATQTA LFLVVPRILE AGGLPVSSHW KIYLPVMGLA FVMMVPAIIA AEKRGKMKAV LLSAIGLILI GQLLLAVAPH TIVTVAAILF VYFLGFNILE ASQPSLVSKL APGTRKGAAA GVYNTTQSIG LAMGGVIGGW LLKVDGQSAV FFACSGLVGC WLIIAASMKQ PPRKA
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