| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0197 |
|---|
| Symbol | |
|---|
| ID | 6241699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 221102 |
|---|
| End bp | 222295 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642591959 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001856436 |
|---|
| Protein GI | 186474966 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGAT ACGGGACGTT TGCATTTTCA AGCTCGCGCC ACAGCGCTTC GAAGCGGCGC
ACGATGCTCG CCGCCGCGCT TTCCGCTTTG CCGGGAGTCG CGCTCGCTCA GGTGAAGATC
GGCCTTGTGC TGTCGCTGAC GGGACCGGCT GCATCGCTCG GCATTCCGGC GCGCGATACC
GCGACGCTGT TTCCGAAAGA GATCGCCGGT CAGAAAGTCG ATTACATCGT GCTCGACGAT
GCGTCCGATA CGACACAAGC CGTACAGGAC ACGAAAAAGC TCATTTCCGA ACATCACGTC
GATGCGATCA TCGGCTCGTC AATCACGCCG AACTCGCTCG CGATGATCGA CGTCATTGCC
GAAGGTGAAA CGCCCGCGAT CTCGCTGGCG TCGTCGGCGA AGATCATCGA GCCCGTCGAC
GCTAAACGGC GCTGGATGTT CAAGACCCCG CAGACGGACG CGATGATGGC CTCCGCGATC
ACCGGGCACG CGAGCCAGCA TGGCGTGAAG ACGCTTGCGT ACATCGGTCA GGCGGACGCG
CTCGGCGAAA CCTTCTATGC GGAAGTCGCG AAGTTCGCGC AGATTCACCA CATCGGCGTG
GTGGCCAACG AGCGATTCAA TCGCACGGAC CCGAGCGTCA CCGGCCAGAT TCTGAAGATC
ATGGCGGCGA ACCCGGATGC TGTCGTCGTG GGCGCGGCGG GCACGCCGGC CGCGCTGCCG
CCGAAGACGC TGATCGGCCG TGGCTACAAG GGCAAGATCT ATCACAACCA CGGCGTGGGC
AATAACGACT TCCTGCGCGT GTGCGGAACC GACTGCAACG GCACCTTCCT GCCCGCGAGC
CCGGTGCTCG TCGCAGCGCA GCTCCCTTCG GACTATGCTT CGAAGCGTCT GGCGCTCGAT
TACATCGCGC GCTTTGAGAA GCTGCGCGGT CCGGGCAGTG TGTCGGCGTT CGGCGCCTAT
GCGTGGGACG CGAGCATGCT GCTCGACAAC GCGATTCCCA TTGCTCTGAA AGCGGCCGCG
CCCGGCACGG CCGAGTTTCG CCGCGCGCTG CGCGATGCGC TGGAAGCGAC GAAAGGACTG
GCCGACACGA ACGGTGTCGT CAACATGAGC GCGACCGATC ACCTTGGCCT CGATCAGCGC
GCGCGCGTGA TGGTCGAGAT CAGCAACGGC AAGTGGGTAT ATCAGCCGCG CTGA
|
|---|
| Protein sequence | MPRYGTFAFS SSRHSASKRR TMLAAALSAL PGVALAQVKI GLVLSLTGPA ASLGIPARDT
ATLFPKEIAG QKVDYIVLDD ASDTTQAVQD TKKLISEHHV DAIIGSSITP NSLAMIDVIA
EGETPAISLA SSAKIIEPVD AKRRWMFKTP QTDAMMASAI TGHASQHGVK TLAYIGQADA
LGETFYAEVA KFAQIHHIGV VANERFNRTD PSVTGQILKI MAANPDAVVV GAAGTPAALP
PKTLIGRGYK GKIYHNHGVG NNDFLRVCGT DCNGTFLPAS PVLVAAQLPS DYASKRLALD
YIARFEKLRG PGSVSAFGAY AWDASMLLDN AIPIALKAAA PGTAEFRRAL RDALEATKGL
ADTNGVVNMS ATDHLGLDQR ARVMVEISNG KWVYQPR
|
|---|
| |