Gene Bphy_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0057 
Symbol 
ID6241561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp66149 
End bp66928 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID642591820 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_001856298 
Protein GI186474828 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGCG TGATCACGGC CAACCTGAAC GGCATCCGTT CGGCGGCCAA GAAGGGCTTT 
TTCGATTGGT TCGGCGAGCA GAAGGCCGAT GTCGTATGCG TGCAGGAAAT CAAATGCTCG
CAGGACGACA TGACGCCAGA GTTCCTCGCG CCGCACGGTT TCACCGGCTA TTTCCAGCAT
GCAGTGAAAA AGGGCTACAG CGGTGCGGGT CTCTATACGC GTCACGAACC GGATGAAGTC
GTGATCGGCT TCGGCAGCGA AGAGTTCGAT CCCGAGGGGC GCTACGTGGA AGCGCGCTTC
GGCAATCTGT CGGTGATTTC GGTGTATGTG CCGTCGGGTT CGAGCGGCGA CGAGCGTCAG
CAGGCGAAGT ACCGTTTCAT GGACGAGTTC ATGCCGCATC TCGCGGAATT ATCGAGGGAG
CGTGAAGTCA TCGTGTGCGG CGACGTGAAC ATCGTGCACA AGGAAATCGA CATCAAGAAC
TGGAAAGGCA ATCAGAAGAA TTCGGGCTGC CTGCCGGAAG AGCGCGCGTG GCTCACGAAG
CTGTTCGACG AAGTCGGCTA CGTCGACGTG TTCCGCACGC TCGACCAGCG GCCCGAGCAG
TACACGTGGT GGAGCAATCG CGGCCAGGCG TACGCGAAGA ACGTGGGTTG GCGTATCGAT
TACCAGATCG CGACGCCGGG CGTCGCGGCC ACGGCGAAGC GCGTCGATGT GTTTCGCGAT
ATCAAGTTCA GCGATCACGC GCCCGTGACC GTCGACTATG CTCACAAGCT GGCGAAATAG
 
Protein sequence
MLRVITANLN GIRSAAKKGF FDWFGEQKAD VVCVQEIKCS QDDMTPEFLA PHGFTGYFQH 
AVKKGYSGAG LYTRHEPDEV VIGFGSEEFD PEGRYVEARF GNLSVISVYV PSGSSGDERQ
QAKYRFMDEF MPHLAELSRE REVIVCGDVN IVHKEIDIKN WKGNQKNSGC LPEERAWLTK
LFDEVGYVDV FRTLDQRPEQ YTWWSNRGQA YAKNVGWRID YQIATPGVAA TAKRVDVFRD
IKFSDHAPVT VDYAHKLAK