Gene Bphy_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0054 
SymbolgatA 
ID6241558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp62165 
End bp63658 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content66% 
IMG OID642591817 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_001856295 
Protein GI186474825 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAGA AAAGCTTGAC CGAACTGCGC GCCGCGCTCG ACGCGAAGCA GTGCTCCGCA 
GTCGAACTGG CGCAGACGTA TCTGAAGCGG ATCGAAGACC GCAAGGCGCT GAACGCGTTC
GTTCACGTCG ACGCGCAGCA GACGCTCGCG CAGGCGCAAG CCGCCGACGC GCTGATCGCG
GCCGGCAACG CCGGTCCGCT GACGGGTTTG CCCATCGCGC ATAAAGACGT GTTCGTTACA
CGCAACTGGC GTTCCACGGC CGGCTCGAAG ATGCTCGAAA ACTACACGAG CCCGTTCGAT
GCCACCGTCG TCGACCGTCT CGCGCAGGCG GGCATGGTGT GCGTCGGCAA GACCAACATG
GACGAGTTCG CGATGGGCTC GTCGAACGAA AACTCGTATT TCGGCCCGGT GCAGAACCCG
TGGGACCGCA AGGCGGTGCC GGGCGGCTCG TCGGGCGGTT CGGCGGCGGC TGTCGCCGCG
CGCCTCGCGC CCGCCGCGAC GGGCACCGAC ACGGGCGGAT CGATCCGTCA GCCCGCGTCG
TTCTCGGGTA TCACGGGCAT CAAACCGACG TACGGCCGCG TATCGCGCTA TGGGATGATC
GCGTTCGCAT CGTCGCTCGA TCAGGGCGGC CCGATGGCGC AGACGGCCGC GGACTGCGCG
CTGCTGCTCA ACGCCATGGG CGGCTTCGAC GAGCGCGATT CGACGAGCCT CACGCACGAT
CACGAAGACT ACACGCGCTA TCTCGGCCAG GACTGGTCGG GCGCGGGCAA TGCGCGCGAC
AAGCCGCTCG CGGGTCTGCG GGTCGGCTTG CCGAAGGAAT ACTTCGGCGC AGGTCTGGCC
GACGACGTGC GCGCATCGAT CGACGCCGCG CTGAAGCAAT ACGAAGCGCT TGGCGCAACG
CTCGTCGAGG TGTCGCTGCC CAAGACCGAG CTGTCGATTC CCGTGTATTA CGTGATCGCG
CCGGCGGAAG CATCGTCCAA CCTGTCGCGG TTCGACGGCG TGCGCTACGG CCACCGCGCG
GCGGAGTATC GCGATCTGCT CGACATGTAC AAGAAGTCGC GCGCAGAGGG TTTCGGCCCC
GAAGTGAAGC GTCGCATTCT GGTCGGCACG TATGTGCTGT CGCACGGCTA CTACGACGCG
TACTACCTGC AGGCGCAGAA GATCCGCCGC ATCATCGCGC AGGATTTCCA GGAAGCGTTC
AGGCATTGCG ACGTGATCAT GGGCCCGGTG GCGCCGTCGG TCGCGTGGGA TATCGGTGCG
AAGGGCGACG ACCCCGTGCA GATGTACCTC GCGGACATCT ACACGCTGTC GGTGAGCCTT
GCCGGTTTGC CCGGCATGAG CGTACCTTGC GGCTTCGGCG CAGGCGCGAA TGCGCAGCGT
CCGGTCGGCT TGCAGATCAT CGGCAACTAT TTCAACGAAG CACGCATGCT GCAAGTGGCC
GACGCGTTCC AGCGCGCCAC CGACTGGCAT CGCATGGCGC CGGCGGGAGT CTGA
 
Protein sequence
MHEKSLTELR AALDAKQCSA VELAQTYLKR IEDRKALNAF VHVDAQQTLA QAQAADALIA 
AGNAGPLTGL PIAHKDVFVT RNWRSTAGSK MLENYTSPFD ATVVDRLAQA GMVCVGKTNM
DEFAMGSSNE NSYFGPVQNP WDRKAVPGGS SGGSAAAVAA RLAPAATGTD TGGSIRQPAS
FSGITGIKPT YGRVSRYGMI AFASSLDQGG PMAQTAADCA LLLNAMGGFD ERDSTSLTHD
HEDYTRYLGQ DWSGAGNARD KPLAGLRVGL PKEYFGAGLA DDVRASIDAA LKQYEALGAT
LVEVSLPKTE LSIPVYYVIA PAEASSNLSR FDGVRYGHRA AEYRDLLDMY KKSRAEGFGP
EVKRRILVGT YVLSHGYYDA YYLQAQKIRR IIAQDFQEAF RHCDVIMGPV APSVAWDIGA
KGDDPVQMYL ADIYTLSVSL AGLPGMSVPC GFGAGANAQR PVGLQIIGNY FNEARMLQVA
DAFQRATDWH RMAPAGV