Gene Bphy_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0046 
Symbol 
ID6241550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp53327 
End bp54109 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content64% 
IMG OID642591809 
Product2-dehydro-3-deoxyglucarate aldolase 
Protein accessionYP_001856287 
Protein GI186474817 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGT TCACGAATCC ACTCAAACTG CGTCTCAAAG ATCCCGACCC GTTGTTCGGG 
CTGTGGCTTT CGCTCGGCAG CGATAACGCA GCCGAGGCGC TCGCGCATGC GGGCTTCGAC
TGGCTTCTGA TCGACATGGA GCACGCGCCG AACGACAGCG TCGACGTCAC GGGTCAATTG
CGCGCGATCG CTGCAGCGCA TTTGCCTACC GAGCCCGTCG TGCGTCTGCC TGCTGTCGAG
CCGTGGCTCG TCAAGCGTGT GCTCGATGCG GGCGCGCGCA CACTGATGTT TCCGAACATC
GAAACCGCCG ACGAAGCCGC GTATGCCGTT CGTCTGACGC AATACGCGAC ATCCGACGCG
CCGGAGGGCT TACGTGGCGT CGCTAGCGTC GTGCGCGCAG CCGCTTACGG CATGCGGCGC
GATTATCTGC AGAACGCCAA CGCGCAGATC GCGACGATCA TCCAGATCGA ATCGCAACAG
GCACTCGAAA ATCTGGAGCA GATCGCGACG ACGCCGGGTG TCGATTGCCT TTTCGTCGGA
CCGGCGGATC TGGCGGCGAG CCTCGGCCAT CTCGGCGATT CCCGGCACCC CGAAGTCCAG
GAAGCGATGA AGCACATTCA GGACGTTGCG CATCGCGCAC GCGTCGCAAC GGGCATCTTC
GCGATCGATG TCGCGAGCGC CCGGCAATAC CGGTCGGAGG GCTTCCGCTT CATCGCGCTG
GCCGCCGATG TGATGTGGCT GTTGCGCACC ACGCGACAGG CACTGCAGGA GGTTCGCTCA
TGA
 
Protein sequence
MSTFTNPLKL RLKDPDPLFG LWLSLGSDNA AEALAHAGFD WLLIDMEHAP NDSVDVTGQL 
RAIAAAHLPT EPVVRLPAVE PWLVKRVLDA GARTLMFPNI ETADEAAYAV RLTQYATSDA
PEGLRGVASV VRAAAYGMRR DYLQNANAQI ATIIQIESQQ ALENLEQIAT TPGVDCLFVG
PADLAASLGH LGDSRHPEVQ EAMKHIQDVA HRARVATGIF AIDVASARQY RSEGFRFIAL
AADVMWLLRT TRQALQEVRS