Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0002 |
Symbol | |
ID | 6241508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 2175 |
End bp | 3278 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642591765 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_001856245 |
Protein GI | 186474775 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.201514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00206466 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAACTGG TCAAGACCGA ACGCGATAAC CTCCTCAGGC CGCTGCAAAC CGTGAGCGGC ATTGTCGAAC GCCGTCATAC GTTGCCGATC CTCGCCAATT TGCTCATCAC CAAGAACGGC CCGGACGTTT CGTTCCTGTC CACCGACCTC GAACTGCAGA TCACCACGCG TGCCGACTTC GGTGTCGGCG GTGAATCGGT GGCCACCACG GTGGCGGCGC GCAAGCTGCT CGACATTCTG CGCGCGATGC CCGACGGGCA GGTCACACTC ACCCTGAACG ACAAGCGTCT GACGGTTCAG TCCGGCAAGA GCCGTTTCGC GCTGCAGACG CTGGCGGCCG ACGAGTTCCC GACCGTCGCT CAAGCTAAAG ACTTCGGCGC GAACCTCGCG GTTCCCCAAA AAACGTTCCG CCAGTTGCTC GGCATGGTTC ATTTCGCGAT GGCGCAGCAG GACATCCGTT ACTACCTGAA CGGCATGTTG CTGGTGGTCG ATGGCGACCA GCTGATGGCC GTGGCAACGG ACGGTCACCG TCTCGCGTAT TCGTCGATGA AGATCGAAGG CTCGTTTGCG CGCCAGGAAG TCATCATCCC GCGTAAGACG ATTCTCGAAC TTCAACGTCT GCTCGAAGAT ATCGACGACG TGCTCAAGAT CGACATCGCG CCGACGCAGG TGAAGTTCAC CTTCGGCGGC GTCGAACTGG TGTCGAAGCT GGTCGAAGGC AAGTTCCCCG ACTTTCAGCG CGTGATCCCG AAGTCGCACA AAAACACGTT CGTGATCGGT CGGGAAGAAC TGCAGCGCTC GCTGCAACGC GCGGCCATTC TGACGTCGGA CAAGTTCAAG GGTGTGCGCT GCATCGTCGA GCCGGGCCAG CTGAAGATCA TGTCCACCAA CGCGGACCAG GAAGAAGCGC AGGAAGAACT CGAAATCCCG TATCAGGGCG ACAGCATCGA CATCGGTTTC AACGTCACGT ATCTGCTCGA CGTGCTCGCG AACCTGAAGG TCGACATGCT GGAAATCAGC CTCGGCGACG CCAGTTCGAG CGCGCTGATC ACGATTCCCG AGAACGACGA GTTCAAATAC GTGGTGATGC CGATGCGCAT CTGA
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Protein sequence | MQLVKTERDN LLRPLQTVSG IVERRHTLPI LANLLITKNG PDVSFLSTDL ELQITTRADF GVGGESVATT VAARKLLDIL RAMPDGQVTL TLNDKRLTVQ SGKSRFALQT LAADEFPTVA QAKDFGANLA VPQKTFRQLL GMVHFAMAQQ DIRYYLNGML LVVDGDQLMA VATDGHRLAY SSMKIEGSFA RQEVIIPRKT ILELQRLLED IDDVLKIDIA PTQVKFTFGG VELVSKLVEG KFPDFQRVIP KSHKNTFVIG REELQRSLQR AAILTSDKFK GVRCIVEPGQ LKIMSTNADQ EEAQEELEIP YQGDSIDIGF NVTYLLDVLA NLKVDMLEIS LGDASSSALI TIPENDEFKY VVMPMRI
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