| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmur_1603 |
|---|
| Symbol | |
|---|
| ID | 9142596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachyspira murdochii DSM 12563 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014150 |
|---|
| Strand | - |
|---|
| Start bp | 1841866 |
|---|
| End bp | 1844280 |
|---|
| Gene Length | 2415 bp |
|---|
| Protein Length | 804 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_003633889 |
|---|
| Protein GI | 296126637 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 71 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATG ATGATAAATC AAATATAGAG CGATTATTCA ATTTAGGACA TGAAGCATTT
AGTAATAACG ACTATAACAA AGCAATAAAT TATTTAGATG AAATTATAGA TATTTATAAT
AAAGATATTA TAGCATATTC TGACGGAGAG TTTATCATAT ACAGCGATTC TTATGATGAT
AATAAAAATG AAGATGAAGA GAGAAATATA GATGATGAAG AGATAAATAT TACTCATAAT
ACATTAGTAG ATGCATATTA TAACAGAGCT ATATCAAAGT TTAATTTAAA AAATTATGAA
GAAGCCATAA AAGATTTTGA CAAGGTAATA GAATTATCTC CAGACAAAAC AGATGCATAT
TATAACAGAG GTCATTCAAA ATCATATTTA AAGAGATATG AAGAAGGTAT TGAAGATTTT
AAAAAAGTAT TAGAGTTTGA TGAAGATGAT TTTGAGGCTG TATATTATGT TGGACTTGGA
TATTTTTATT TGGCAAACTA TGAAGAGGCT ATTAAGAATT TTGACTTGGC TTTATATCTA
ATAGAAAAAA CAGAAGAAGA ATATATTGCA GATATTTATT ATTACAGAGG ACATTCTAAA
TCATATTTAA CAAGATATGA AGAGGCTTTA TCCGATTTTA ATAAACTTGT ACAATTAAGA
GAAGATGATA GCGAAGCATT TTATTTTAAA GCATTAACTG AGTTTTATTT AGGTTTGTAC
GAAGAGGCAA TAAATGATTT TGATATATCT ATAGAGCTTG ATTCTAATGC ATCAAATGCC
TACTATTTCA GAGGGCTTTC AAAAAGTAAT TTGGAGTTAT ATGATGAAGC TAGAGAAGAT
TATCAAAAAG CAATAGATTT TGACCCAGAA AATATAATCA GTATTTATAA TGATGCTGGA
CTTATTGAAT ATAAATTGGG CAACTATAAA GAAGCTATTA AATACTATAC AAAAATAATA
GAAAAAGATG AATATATATC ATATATCTAT TATAACAGAG CATTAGCAAA AGAGGCATTA
GAATTGTATG AAGATGCATT AAAAGATTAT GACAAAGCTA TAGAGCTTAA TCCAGACGAC
ACATATTCTT ACAATAACAG AGGACTTATC AAAAATGAAA TGCAGATGTA TGATGAGGCA
CTAGAAGATT ATAACAAGGC TATAGAGCTG GAACAAAATG ATGCTTATTT ATACAATAAT
AGGGCTTTAT TAAAGGGAAG AATACATTTA TACAGAGAGG CTTTAGAAGA TTTTGACAAG
GCTATTTCTC TATATGATGA AAACAGTGAG TTTTACTATT TCAGAGGGCT TACCAATTTT
TATTTAAATG AATTTGATGA GGCTTTAAAA TATATTAACA AAGCTATTGA ATTAAATAAT
GAATATATAG ACGCTTATAA TGAAAGAGCA ATTATATATT ATAGAACTGA AAATTATGAT
GAAGCTATTA AGGATTTTAA AAAAGTATTA GAACTTGATA ATGAAAATGT ATATGCTTAT
TATCATTTAG CTTTATCTTA TGAATGTTTG GAAGATTATG ATAATGCTGT AAAATATTAT
ACTAAAGTTA TTGAGCTTGA TAATAATTCA TTAGAGGCAT ACTATAACCG AGCTTTAGCA
AAAATGGAAA TTAATCTATA TAATGAAGCT ATAGAAGATT TTAAAAGAAT AATAGAACTT
GATAAAGAAA ATACAGACGC TTATCTTAAT ATAGGTATAT GCTATGACTA TATGGAAGAA
TATAATAAAT CAATAGAATA TTATACCAAA GTCATAGAGA TAGATAATAA AGCATTAGAC
GCATACTATA ACAGAGGACT AAGCAAGGTA GCATTAAAAC TATACAATGA AGCTTTTGAA
GACTTTATAA GAGCAATTGA TATTAACTCT AATTATTTAA ATGCCTATAA TGGAATAGGT
TTTTCAAAGA CAAAATACTC TAATAATGAA CTTAAAAAAG GAAACATTAA TAAAGCTATA
GAACTACTTA ATGATGCATT AGTTTATTAT AATAAAGGGC TTGCTTTAGA TATAGATGAT
AATATAACCA ATGCCTCAAT ATATGACAGT ATGGGATATA CTATTACAAA ATTGGCTAAT
ATATATCAGA CTATGAATGA TAAAGAAAAT GCTTTAAAAT ATTATGATGA GGCATTATTT
TGTTTTAATG AAGCTATTAA ACTAAATAAT AAACATGCAC TTGCTCATAA CAGCATAGCA
TATATTAAAA TACAGCTTGA TAAGATGAAT AATATAATTG ATAAACTAAA TGAAGAGTCT
TATGATTACT TTGAAAAAGC ATATAATATG TCAAATAAAG ATGATAAAAA ATTGATATTA
AAATGTATTG TTTCATTAGC CAAAGAAAAT ATAAAAACAG CTTTGGAGTT TATAAATAAA
AATAATTTAA ATTAA
|
|---|
| Protein sequence | MNNDDKSNIE RLFNLGHEAF SNNDYNKAIN YLDEIIDIYN KDIIAYSDGE FIIYSDSYDD
NKNEDEERNI DDEEINITHN TLVDAYYNRA ISKFNLKNYE EAIKDFDKVI ELSPDKTDAY
YNRGHSKSYL KRYEEGIEDF KKVLEFDEDD FEAVYYVGLG YFYLANYEEA IKNFDLALYL
IEKTEEEYIA DIYYYRGHSK SYLTRYEEAL SDFNKLVQLR EDDSEAFYFK ALTEFYLGLY
EEAINDFDIS IELDSNASNA YYFRGLSKSN LELYDEARED YQKAIDFDPE NIISIYNDAG
LIEYKLGNYK EAIKYYTKII EKDEYISYIY YNRALAKEAL ELYEDALKDY DKAIELNPDD
TYSYNNRGLI KNEMQMYDEA LEDYNKAIEL EQNDAYLYNN RALLKGRIHL YREALEDFDK
AISLYDENSE FYYFRGLTNF YLNEFDEALK YINKAIELNN EYIDAYNERA IIYYRTENYD
EAIKDFKKVL ELDNENVYAY YHLALSYECL EDYDNAVKYY TKVIELDNNS LEAYYNRALA
KMEINLYNEA IEDFKRIIEL DKENTDAYLN IGICYDYMEE YNKSIEYYTK VIEIDNKALD
AYYNRGLSKV ALKLYNEAFE DFIRAIDINS NYLNAYNGIG FSKTKYSNNE LKKGNINKAI
ELLNDALVYY NKGLALDIDD NITNASIYDS MGYTITKLAN IYQTMNDKEN ALKYYDEALF
CFNEAIKLNN KHALAHNSIA YIKIQLDKMN NIIDKLNEES YDYFEKAYNM SNKDDKKLIL
KCIVSLAKEN IKTALEFINK NNLN
|
|---|
| |