Gene Bmur_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBmur_1230 
Symbol 
ID9142215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachyspira murdochii DSM 12563 
KingdomBacteria 
Replicon accessionNC_014150 
Strand
Start bp1426591 
End bp1427583 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content26% 
IMG OID 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_003633523 
Protein GI296126271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAT CTTATTATTT ATTTTCAAGC GGAGAGCTTA AAAGAAAAGA TAATACGCTT 
CAGTTTATCA AATCAAACGG CGAGAAAAGA GATTTACCCA TACAGATAAT TTATGATATA
TATATTTTTT CTGAGGTTAC AATAAATACT AAACTGCTTA ATTTTTTATC GCAGATTGGA
ATATGCGTGC ATTTTTTTAA TTATTATGAG TTTTATTCTG GAAGTTTTTA TCCTAGAGAA
AAATTAGTTT CTGGGGATTT GCTTGTTCAT CAGGTTATGC ATTACAGTGA TTATGATAAA
AGGGTATCAC TTGCCAAAAA ATTTGTTTAT GGAGCTTCTG ATAATATACT AAGAAATTTA
AAATATTATG ATAATAGAGG ACGTGATTTG AAAGAGGAAA TCAAAAGCAT AGAAAAATTA
AAATCAAGTA TAGATTTGTA TTATAATATT AATGAAATAA TGGGAATAGA AGGCAATATT
CATAAAGTTT ATTACAGTTC TTGGAAAAAA ATTATTAATC AGGAAATAGA TTTTGAAAAA
AGAGTAAAAC GCCCTCCTGA TAATATGATA AACTCGCTTA TAAGTTTTTT GAACTCTGTA
CTTTATACAA AGGTGTTATC TGAGATTTAT AAAACACAAT TAAATCCTAC TATAAGTTAT
TTGCATGAAC CGTCTGTAAA AAGATTTTCA TTATCACTTG ATACAGCAGA AATTTTTAAG
CCATTAATAG TTGACAGACT TATATTTTCA TTATTAAATA AAAAGATGAT AAGCGAAAAT
GATTTTGATA AAGATAGCAA TTTTTTAAGA CTAAAAGATA AAGCATTAAA AACAATAATG
GAAGAATTAG AGAAAAGACT TACCACTACT GTTAATCATA GGAGTTTGAA AAGAGATGTA
TCGTATAAGC ATTTGATTAG ATTAGAACTT TATAAAATCT CTAAACATTT GCTTAATGAA
AAAGAATATA AACCTTTTGT AATATGGTGG TAA
 
Protein sequence
MSKSYYLFSS GELKRKDNTL QFIKSNGEKR DLPIQIIYDI YIFSEVTINT KLLNFLSQIG 
ICVHFFNYYE FYSGSFYPRE KLVSGDLLVH QVMHYSDYDK RVSLAKKFVY GASDNILRNL
KYYDNRGRDL KEEIKSIEKL KSSIDLYYNI NEIMGIEGNI HKVYYSSWKK IINQEIDFEK
RVKRPPDNMI NSLISFLNSV LYTKVLSEIY KTQLNPTISY LHEPSVKRFS LSLDTAEIFK
PLIVDRLIFS LLNKKMISEN DFDKDSNFLR LKDKALKTIM EELEKRLTTT VNHRSLKRDV
SYKHLIRLEL YKISKHLLNE KEYKPFVIWW