Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bmul_4227 |
Symbol | |
ID | 5769403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia multivorans ATCC 17616 |
Kingdom | Bacteria |
Replicon accession | NC_010086 |
Strand | + |
Start bp | 1262243 |
End bp | 1263550 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641318528 |
Product | shikimate transporter |
Protein accession | YP_001584200 |
Protein GI | 161520773 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.29234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGA CCTTCGACAC CCTCGACGCC GCTGCCGGCG CCCGGGCGCG CACCCAGGCC CGCAAGGCCG CGATCGGCAG CTTCGTCGGC GCCGTCGTCG ACTGGTACGA CTTCCTGCTG TACGGGATTG TCGCCGCGCT CGTATTCAAC GCCGAGTTCT TTCCGAAAGT AAGCCCGACG ATGGGGACGC TCGCGGCGTT CGCGACATTC GGCGTCGGCT TCCTGTTCCG TCCGCTCGGC GGCGTCGTGT TCGGCCATTA CGGCGACCGG CTCGGCCGCA AGCGAATGCT CGTGCTGACC GTGATGCTGA TGGGGCTGTC GACGGTCGCG ATCGGGCTGC TGCCCACGTT CGCGACGATC GGCTGGTGGG CGCCCGTGCT GCTGGTCGCG ATGCGCGCGA TCCAGGGCTT CGCGGTCGGC GGCGAATGGG GCGGCGCGGC GCTGATGGCC GTCGAAAGTG CGCCGAAGCA GAAGAAGGCG TTCTACAGCA GCGGCGTCCA GGTCGGCTAC GGCGTCGGGC TGGTGCTCGC CACCGGCATC GTGTCGATTC TGAGCCACAC GCTCGGCGAC GCCGCGTTCA AAACCTGGGG CTGGCGCCTG CCGTTCGTGT TCAGCATCGT GCTGGTGCTG ATCGGGCTGT GGGTGCGCAA GAGCATGGAC GAGTCGCAGG AGTTCGTCGA GAAGGTCGAG CACGGCCACC GCAAGCTGCG GCTGCCTGTG CTGGAAGCGC TGACGCGTCA TCCGAAGGCG TTTCTGCTGA TCGTCGCGCT GCGGCTCGCG GAGCTGTTCA CGATGTACAT CGTCACCGCG TTCGCGCTCA GCTATTCGAC GTCGAACCTC GGCATGTCGC GCGATCTGTT CCTGAACATC GGGCTGCTGG TCGGCGCGGT GAGCTGCGTG ACGATTCCGT GCTTCGCGTG GCTCGCCGAT CGCTTCGGGC TGCGCCGCAT CTATTTGATC GGCGCGCTGA TCGGCCTTGC ATCGGCGGTG CCGTTCTTCG TCGCGCTCGA GTCGCGGTCG ATCGCGTGGA TCGTGCTGTT CTCGATCCTG CTCGCGAACG CGGCGCACGA CATGGTCGTC AGCGTCCAGC AGCCGCTGTT CACCGAACTG TTCGGCGCCG AGTATCGATA CAGCGGCGCG GGCGTCGGCT ACCAGTTCGC GAGCGTCGTC GGCGGCGGGT TCACGCCGTT CATCGCGGTC GGCCTCGTCA GCCTGGCCGG CGGCTCGTGG CACCTCGTCG CCGGTTATCT CGCGGCCGGC TGCCTGATTT CGCTCGTGGT GGCGGCGCGG ATGCGGGCTG CGGGCTGA
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Protein sequence | MTPTFDTLDA AAGARARTQA RKAAIGSFVG AVVDWYDFLL YGIVAALVFN AEFFPKVSPT MGTLAAFATF GVGFLFRPLG GVVFGHYGDR LGRKRMLVLT VMLMGLSTVA IGLLPTFATI GWWAPVLLVA MRAIQGFAVG GEWGGAALMA VESAPKQKKA FYSSGVQVGY GVGLVLATGI VSILSHTLGD AAFKTWGWRL PFVFSIVLVL IGLWVRKSMD ESQEFVEKVE HGHRKLRLPV LEALTRHPKA FLLIVALRLA ELFTMYIVTA FALSYSTSNL GMSRDLFLNI GLLVGAVSCV TIPCFAWLAD RFGLRRIYLI GALIGLASAV PFFVALESRS IAWIVLFSIL LANAAHDMVV SVQQPLFTEL FGAEYRYSGA GVGYQFASVV GGGFTPFIAV GLVSLAGGSW HLVAGYLAAG CLISLVVAAR MRAAG
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