| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmul_2907 |
|---|
| Symbol | |
|---|
| ID | 5767984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia multivorans ATCC 17616 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010084 |
|---|
| Strand | + |
|---|
| Start bp | 3173757 |
|---|
| End bp | 3177704 |
|---|
| Gene Length | 3948 bp |
|---|
| Protein Length | 1315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641315365 |
|---|
| Product | type VI secretion protein IcmF |
|---|
| Protein accession | YP_001581088 |
|---|
| Protein GI | 161526076 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.531051 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGCA TCCTCAACGT GCTGACTCAC CCGCGTACGC TCTCGATCGT CGGGATCGTC
GCGCTCGCGG CGATCCTCTT CATCGTCGCC GACATGCTGC AGCTACCGCT GCTGTGGGCC
GCGATCGCGC TCGCGGCGAT CCTCGCGCTG TGGCTCGCGG TCGCGCTCTG GCGGCGCTGG
CGCGTGAAGC GCGCGAACCG GCAGCTCGGC GAGGTGCTCG AAGAACAGGC CGAAACCGGC
AAGATCGCGG CGCCCGCCGC GGCGGCCGTC GCGCCCGATG CGAAGACGGC CGACCTCGAC
GCGCTGCGCA CGCGCCTGTC CGACGCGGTG AAGACGATCA AGACCTCGAA GATCGGCCAG
GTATCGGGCG GCTCCGCGCT GTACGAACTG CCGTGGTACA TCGTGATCGG CAACCCCGCC
GCCGGCAAGA GCAGCGCGGT GATCAACTCC GGCCTGCAGT TCCCGTTCGC CGACAAGAAC
AGCGCCGTGA TCCACGGCAT CGGCGGCACG CGCAACTGCG ACTGGTTCTT CACGACCGAA
GGGATCCTGC TCGACACCGC GGGCCGCTAC TCGGTTCACG AGGAAGACCG CAGCGAATGG
CTCGGCTTCC TCGGCCTGCT GAAACGCTAC CGCCCGAAGG CGCCGATCAA CGGCATCATC
GTGACCGCGA GCATCGCCGA ACTCACCGGC AACCGCCCCG AATTCGCGAT CAATCTCGCG
AAAAACCTCC GTCAGCGCGT TCAGGAGCTG ACCGAAAAGC TGGAGGTGTT CGCGCCCGTC
TACGTGATGT TCACGAAGGC GGACCTCATC ACCGGCTTCA CCGAATTCTT CAGCAGCAGC
GACAAGCACG AGTACGACCG CGTGTGGGGC GCGACGCTGC CGTACGAACC GGACGAGAAG
CGCGACGTCG TCGCGCTGTT CGACGAGCGC TTCGAGGAAC TCTACGAAGG GCTGAAGGAA
ATCAGCATCG CGCAGCTGTC GCTGTCGCGC GGCCATCAGC TGTCGCCGGG CCAACTGAGC
TTCCCGCTCG AGTTCTCGAC GATCAAGCCG GCGCTGCGCG CGTTCCTCGC GACGCTGTTC
GAGAACAACC CGTTCCAGTA CAAGCCGATC TTCCGCGGCT TCTACTTCAC GAGCGCGCTG
CAGGAAGGCG AAACCAGCAG CGCGGCCGCG CAGCGCATCG CACACCGCTT CGGCCTCGAC
GCGACCGCGC TGCCGAAGCC GCACAGCGCG TTCTCGAAGA ACGGCTTCTT CCTGCGCGAC
CTGTTCTCGA AGGTCATCTT CGCCGACCGC CAGACCGTGC GCCAGTTCGC GAGCCCGACC
AAGACGCGGC TGCGCTACGC GACCTTCTTC GGCTTCGTCG CGGCGCTCGC ACTCGCGCTC
GGCGGCTGGA CGTGGTCGAC GATCGGTAAC CAGCAGCTCG TCGCGAACGT GCAGGCCGAT
CTCGACAACG TCACGCGCCT GCAGCAGGGC CGCAACGATC TGCAGTCGCG GCTGCAGGCG
ATGGACATCC TCGAGGACCG CATCGAGCAA CTCGAACAGT TCCGCCGCGA CAAGCCGCTG
TCGGTGTCGC TCGGCCTGTA TCAGGGCGAT CGTCTCGAAC AGCACCTGCT CACCGAGTAC
TACAACGGCG TGCGGCAGAT CCTGCTGAAC CCGGTTTCGC AGAACCTCGC GTCGTTCCTG
AAGGACGTGA ACGCACACCC CGACCAGCTC GTGCCGATGA CGCGGCCGCC CGAATCGGGC
GCCGTGCAGG CGAGCGCGCT GCCGGTATCG ACGAACCCGG CGGGCGCCGC GCAGCAGGCC
GGCGCCGCGC AACCGTCGTC GTCCGTCGCG GGTGCGCTGG CCGCGCCGCA ACCGCCGGCC
GCGCCGCAAG GCGGCCTGTA CAGCGACGCG TCGCCGACCA ACGTGCAGGA CGCGTACAAC
GCGCTGAAGA CCTACCTGAT GCTGTCCGAC AAGCGCCACG TCGAACAGGC GCACCTGACC
GACCAGCTCG CGCGCTTCTG GCGCGGCTGG CTCGAGACGA ATCGCGGCAA CATGCCGCGC
GACGAGATGA TCAAGAGCGC CGAGCGCATG ATCTCGTTCT ATCTCGCGCG CGTGAACGAC
GACGACTGGC CGATGATCGA CGCGAACCTC GCGCTCGTCG ACCAGACGCG CGAGAACCTG
CGTCGCGTGG TGCGCGGCAT GCCGGCCCGC CAGCGCGTGT ACGAGGAAAT CAAAGCACGC
GCGTCGACGC GCTTCGCGCC GATGACCGTC GCGCGCATCG TCGGCGACGG CAACCAGGCG
CTGATTGCCG GCAGCTATGC GATTCCGGGC ACGTTCACGC GCGACGCGTG GTTCGACTAC
GTGCAGCCCG CGATCCGCGA CGCGGCGACC AAGGAGCTGC AGGCGAAGGA CTGGGTGCTC
AATACGTCGA CGCAGGACGA CTTGACGCTC GAGGGCAGCC CCGAGCAGAT CCAGAAGACG
CTGGTCGGGA TGTACAAGAC CGAGTACGCG CAGCACTGGC AGAAGTTCAT GCAGGGCATC
GCGGTGCAAG GCTTCAGCAG CTTCGGCCAG GCCGTCGACG GCATGAACCG CCTCGGCGAC
CCGCAGGACT CGCCGATCCG CAAGATCCTC GAGACCGCGT ACGAGCAGAC GTCGTGGGAC
AACCCGTCGC TGGCGAACGT CGCGATCAAG AAGGCGCAGA CCGGCGTGGT GAACTGGGTC
AAGCAGTTGT TCACGCGCTC GCAGGCCGGC CAGGTTGCGG CCGCCAACAT CGACATCAAC
GGCAATCCGG TCGAGGTGCC GATGGGGCCG ATCGGCCAGG AGTTCATCGG CCTCGCGCGA
ATCGTCGCGA CGCACGACGG CACGTCGATG CTGAAGGGCT ACATGGACAC GCTGTCGAAG
GTGCGCACGC GCTTCAACGT GATCAAGAAC CAGGGCGATC CGGGGCCCGG CGCGCGCCAG
CTGATGCAGC AGACGCTCGA CGGCAACGGC TCGGAGCTCG CCGATTCGCT GAAGTTCGTC
GACGAGCAGA TGCTGACCGG CCTCACCGAT TCGCAACGCA AGGCGCTGCG CCCGCTGCTC
GTGCGTCCGC TGATGCAGGC GTTCTCGGTC GTGATCCAGC CGGCCAGCGT CGAGGTCAAC
AAGGTGTGGA ACGCGCAGGT CTATCAGCCG TTCCAGAGCT CGCTCGCGAC CAAGTATCCG
TTCGCGGCGA ACGCGAAGGT CGAGGCCGGC GCCGGCGAGA TCGCACAGGT GTTCGGTCCG
GACGGCTCGA TCGCGAAGTT CGTCGGCACG ACGCTCGGGC CGCTCGCCGT ACGCCGCGGC
GATACGCTTG CCGCGCGTAC GTGGGGCGAC ATGGGCCTCG CGCTCGCACC GGACTTCACG
AACGGCTTCG CGCGCTGGGT CGCACCGCTC GCGGGCGGCG CGGCCGGCGG TGCCGCCGCG
TCGTCGGAAC CGCAGACCGT ATTCCAGATC CTGCCGCAGC CGAGCACCGG CACGACCGAA
TACACGGTCG CGATCGACGG CCAGCAGCTG CGCTACCGCA ACACGCCGCC GCAGTGGACC
AACTTCGTGT GGCCGAACCC GCAGGGCTCG CCGGGCGCGA CGCTGTCCGC GACGACGTTC
GACGGGCGCA CCGTGCAGCT CGTCAACGAG CCGGGCCGCT ACGGTCTCGA GAAACTGATC
AACTCCGCGC AGCGCAAGCG GCGGCCGGAC GGCACGTTCG ACCTCACGTG GACGCAGGGC
AGCGTGAGCG TGTCGGTGAC GATGCGCATC ATCAGTACGT CGCAGCCGAC GAGCGGCGGC
GGCGACCAGC CGCAGCAGCA GAGCCTGCGC GGGCTGCAAC TGCCGTCGTC GGTCGTCGAC
GCGAGCGCGG GCGCCGCACA GAACGCGGCC CAGGCCGGCG CCGGCGCGCC GGCCGCCGCG
CCGACCGTCG CGGCCGCTAC CGGTTCGAAT GCACAGGGGG CGCAATGA
|
|---|
| Protein sequence | MQRILNVLTH PRTLSIVGIV ALAAILFIVA DMLQLPLLWA AIALAAILAL WLAVALWRRW
RVKRANRQLG EVLEEQAETG KIAAPAAAAV APDAKTADLD ALRTRLSDAV KTIKTSKIGQ
VSGGSALYEL PWYIVIGNPA AGKSSAVINS GLQFPFADKN SAVIHGIGGT RNCDWFFTTE
GILLDTAGRY SVHEEDRSEW LGFLGLLKRY RPKAPINGII VTASIAELTG NRPEFAINLA
KNLRQRVQEL TEKLEVFAPV YVMFTKADLI TGFTEFFSSS DKHEYDRVWG ATLPYEPDEK
RDVVALFDER FEELYEGLKE ISIAQLSLSR GHQLSPGQLS FPLEFSTIKP ALRAFLATLF
ENNPFQYKPI FRGFYFTSAL QEGETSSAAA QRIAHRFGLD ATALPKPHSA FSKNGFFLRD
LFSKVIFADR QTVRQFASPT KTRLRYATFF GFVAALALAL GGWTWSTIGN QQLVANVQAD
LDNVTRLQQG RNDLQSRLQA MDILEDRIEQ LEQFRRDKPL SVSLGLYQGD RLEQHLLTEY
YNGVRQILLN PVSQNLASFL KDVNAHPDQL VPMTRPPESG AVQASALPVS TNPAGAAQQA
GAAQPSSSVA GALAAPQPPA APQGGLYSDA SPTNVQDAYN ALKTYLMLSD KRHVEQAHLT
DQLARFWRGW LETNRGNMPR DEMIKSAERM ISFYLARVND DDWPMIDANL ALVDQTRENL
RRVVRGMPAR QRVYEEIKAR ASTRFAPMTV ARIVGDGNQA LIAGSYAIPG TFTRDAWFDY
VQPAIRDAAT KELQAKDWVL NTSTQDDLTL EGSPEQIQKT LVGMYKTEYA QHWQKFMQGI
AVQGFSSFGQ AVDGMNRLGD PQDSPIRKIL ETAYEQTSWD NPSLANVAIK KAQTGVVNWV
KQLFTRSQAG QVAAANIDIN GNPVEVPMGP IGQEFIGLAR IVATHDGTSM LKGYMDTLSK
VRTRFNVIKN QGDPGPGARQ LMQQTLDGNG SELADSLKFV DEQMLTGLTD SQRKALRPLL
VRPLMQAFSV VIQPASVEVN KVWNAQVYQP FQSSLATKYP FAANAKVEAG AGEIAQVFGP
DGSIAKFVGT TLGPLAVRRG DTLAARTWGD MGLALAPDFT NGFARWVAPL AGGAAGGAAA
SSEPQTVFQI LPQPSTGTTE YTVAIDGQQL RYRNTPPQWT NFVWPNPQGS PGATLSATTF
DGRTVQLVNE PGRYGLEKLI NSAQRKRRPD GTFDLTWTQG SVSVSVTMRI ISTSQPTSGG
GDQPQQQSLR GLQLPSSVVD ASAGAAQNAA QAGAGAPAAA PTVAAATGSN AQGAQ
|
|---|
| |