| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3773 |
|---|
| Symbol | |
|---|
| ID | 6198049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010580 |
|---|
| Strand | - |
|---|
| Start bp | 84891 |
|---|
| End bp | 86063 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641703911 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_001831063 |
|---|
| Protein GI | 182676916 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAT CCGCCCTGCC CTTGCCGGAA AAACCTCTCG AGGCCGGGAC AGTTCCGCGG
CTCGATGCTC TGGCGTCGAT CCTGCCCGGC GAGCGGCGGG AGGGCCTGGC CACCCAGCTG
ACCGACGAGG ATGTCGCGAC CCTCAAGCAT CTCGTCGAGA TCGGGATGGG CGCCAACACC
CTGCGGGCGC TCGCCTCCGA TTGTGCCTAT CTCGAAGCCT GGGCGCAGGC GGCGACGGGC
TCTCCCCTGC CGTGGCCGGT CCCCGAAGCC CTGGTCCTGA AATTCCTGGC GCATCATCTG
TGGGATCCGA TCCGGCGCGA GATCGATCCC GAGCACGGCA TGCCGGAGGG AGTGTCTGCA
GCCTTGCGCG CTTCTGGACA GCTGCGGGTC GAAGGGCCGC ATGCGCCCGC GACGGTCGAG
CGGCGGCTCG CCAGCTGGCG CACTCTGCAC CGCTGGCGCG GTCTCGAGGG ACCGTTTACC
TCCCCCACCC TGCGCTCGGC CTGGCGGCTC GCCGTGCGGG CTAATCCGCG GCCGCGCCAG
CGCAAGAGCG CCAAGGCGGT CACCAAGGAT GTGCTCACCG AACTGTTGAA GACCTGCCAT
GGCGGGAGGC TGGTCGATCT CCGCGATCGG GCTTTGCTTC TTGTAGCCTT CGCCTCGGGC
GGGCGGCGGC GCAGCGAAGT GGCGGGTCTG CGCGTCGAGC AGCTGCACGA GGAAGCGCCC
GTGCCGGCGG ATCCCCTGGA CCCCATGTCT CCCCGCCTGC CCTGCCTGTC GATTCAACTC
GGTCGCACAA AGACCAGCGA TGCCGATGAG GATGCCCGCG TCCTGCTGGT CGGCTCTCCG
GTCGAGGCCT TGCGCGCCTG GATGAAAGTA GCTGCCATCA CCAAAGGCGC CCTGTTCCGG
CCGATCGACT GCTGGGACAA TGTCGCCCCT TGTGCCCTGA CCCCGCAGGC GGTCAACCAG
ATCCTCAAGC AGCGCTGCGC CAAGGCCGGG CTCGACCCCA GACTGTTCTC CGCGCATGGG
CTGCGCTCCG GCTATCTCAC CGAGGCGGGC AGGGCCGGGG TCTCCCTGCC CGAAGCCATG
CAGCAGTCAC AGCATCGCTC GATCCAGCAG GCCGCCCGCT ATTATAACGA TGCCGAACGC
CGGTTGGGGA AAGCGGCGAG GATCCTGGAG TGA
|
|---|
| Protein sequence | MRKSALPLPE KPLEAGTVPR LDALASILPG ERREGLATQL TDEDVATLKH LVEIGMGANT
LRALASDCAY LEAWAQAATG SPLPWPVPEA LVLKFLAHHL WDPIRREIDP EHGMPEGVSA
ALRASGQLRV EGPHAPATVE RRLASWRTLH RWRGLEGPFT SPTLRSAWRL AVRANPRPRQ
RKSAKAVTKD VLTELLKTCH GGRLVDLRDR ALLLVAFASG GRRRSEVAGL RVEQLHEEAP
VPADPLDPMS PRLPCLSIQL GRTKTSDADE DARVLLVGSP VEALRAWMKV AAITKGALFR
PIDCWDNVAP CALTPQAVNQ ILKQRCAKAG LDPRLFSAHG LRSGYLTEAG RAGVSLPEAM
QQSQHRSIQQ AARYYNDAER RLGKAARILE
|
|---|
| |