| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3336 |
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| Symbol | |
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| ID | 6200460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 3792358 |
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| End bp | 3793509 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641707284 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001834384 |
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| Protein GI | 182680238 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0627884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGAAA CCGCGCTCGA TCTCGCCCGC GCCCTCATTT CCTGTCCTTC CGTCACACCG
CAGGACGGCG GCACGCTCGG TGTCCTCGAA AGCCGGTTGA AGGCATCGGG CTTTCGCACC
CATCGCCTAA CCTTCCACGA AGAAGGCACG CCCGATATCG ACAATCTCTA TGCCCGTTTC
GGCTCAGGCG CGCCTTGTCT CGTTTTCGCC GGCCACACGG ATGTCGTGCC TGTCGGCACA
GCCACGGATT GGCGGTTCGA TCCCTTCGCG GCCAAGGTCG AGGATGGCCA GCTTTGGGGA
CGCGGCGCCG CCGATATGAA GGGTGCCATC GCCGCATTCA CGGCGGCGGC TCTTACCTTT
ATCGAACAGC ACAAGGATTT TAAGGGCTCG ATCGCCTTCC TCATCACCGG TGATGAAGAA
GGCCCCTCGA TCAATGGCAC GATCAAGCTT CTGAAATGGG CGGCCGAACA GGGCGAACAC
TTCGATCATT GTATCGTTGG CGAGCCGACC AATCCGCAAG TACTCGGCGA CATGATCAAG
ATCGGCCGGC GGGGTTCGCT GAATGGCATT TTGAGCATCA CCGGCAAACA GGGCCATGTC
GCCTATCCGC ATCGCGCCGA TAATCCTGTT CCCAAACTGA TGCGCCTCAT TGAGGCACTG
ATCGGCACGC CCCTTGATGA AGGCACAGAT CATTTCGACG CCTCCAATCT TGAAGTGGTC
GCGCTCTCGT CAGGAACCGA CGCCTATAAT GTCATTCCGG CGAAAGCGGA GGCGCGTTTC
AACATTCGTT TCAATGATCT GTGGACACCG CAGACATTGG AGCTCGAGCT GCTCGCACGG
CTCGACAGCG TGGCAGAAGG AACCGCATAC ACACTCACTT TCGAGCCCTG TAACGCGCTC
GCCTTCATTA CAAAGCCAGA TCAATTTACA GATCTCGTCG CAAACGCGAT CGAGAAACAG
ACCGGCCGTC GCCCGGAACT TTCCACGACC GGCGGCACAT CGGACGCGCG GTTTATTTCC
GCCTATTGCC CAGTCGTCGA ATTCGGGCTC GTGGGGCAGA CCATGCACAT GGTCGATGAA
CGAGTGTCCG TGGCTGACAT TGCTACATTG GAAACTATAT ACACTTCTAT TTTAGAAGGT
TATTTCCCGT AA
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| Protein sequence | MSETALDLAR ALISCPSVTP QDGGTLGVLE SRLKASGFRT HRLTFHEEGT PDIDNLYARF
GSGAPCLVFA GHTDVVPVGT ATDWRFDPFA AKVEDGQLWG RGAADMKGAI AAFTAAALTF
IEQHKDFKGS IAFLITGDEE GPSINGTIKL LKWAAEQGEH FDHCIVGEPT NPQVLGDMIK
IGRRGSLNGI LSITGKQGHV AYPHRADNPV PKLMRLIEAL IGTPLDEGTD HFDASNLEVV
ALSSGTDAYN VIPAKAEARF NIRFNDLWTP QTLELELLAR LDSVAEGTAY TLTFEPCNAL
AFITKPDQFT DLVANAIEKQ TGRRPELSTT GGTSDARFIS AYCPVVEFGL VGQTMHMVDE
RVSVADIATL ETIYTSILEG YFP
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