Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3241 |
Symbol | |
ID | 6198986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 3684895 |
End bp | 3685467 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641707190 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001834290 |
Protein GI | 182680144 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCAGCC GGCAGATGAC CTCCGATCTC ATCGCGGTCA TTCCCAATCT ACGCGCCTTC GCGGTCTCGC TCTGCGGCAA TCTCGACCGC GCCGACGATC TCGTGCAGGA AACCCTGGTC AAGGCCTGGA GCAATCTCGA TTCCTTCGTC GAGGGCACCA ATCTGCGCGC CTGGCTGTTC ACCATTTTGC GCAATATCTA TTATTCCGAA TATCGCAAAA GGCGGCGTGA GGTGGCCGAT TCCGATGGGG CGATCGCGGC CAAACTGGCG ACGGCGCCAG CCCAGAACGG TCATATGGAT CTGCTCGATT TCCGCGAGGC GCTCCAGCAA TTGCCGCATG ACCAGCGCGA AGCCCTGATT TTGATTGGCG CCTCTGGCCT TTCCTACGAG GAAGCCGCCA ATATTTGCGG CTGCGCCGTC GGAACCATGA AAAGCCGCGT GAACCGGGCG CGGGGCCGGC TTGCCGATCT CCTGTCGATT TCCTCAGCGG CCGAATTTGG AGATGATGGA GACTGGCAAG CCGCCGATCC GAGCCTCATT GGCCAGCATT ATTCCCGCGC CGGCAACGAT TGA
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Protein sequence | MASRQMTSDL IAVIPNLRAF AVSLCGNLDR ADDLVQETLV KAWSNLDSFV EGTNLRAWLF TILRNIYYSE YRKRRREVAD SDGAIAAKLA TAPAQNGHMD LLDFREALQQ LPHDQREALI LIGASGLSYE EAANICGCAV GTMKSRVNRA RGRLADLLSI SSAAEFGDDG DWQAADPSLI GQHYSRAGND
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