Gene Bind_3241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_3241 
Symbol 
ID6198986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3684895 
End bp3685467 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content61% 
IMG OID641707190 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001834290 
Protein GI182680144 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGCC GGCAGATGAC CTCCGATCTC ATCGCGGTCA TTCCCAATCT ACGCGCCTTC 
GCGGTCTCGC TCTGCGGCAA TCTCGACCGC GCCGACGATC TCGTGCAGGA AACCCTGGTC
AAGGCCTGGA GCAATCTCGA TTCCTTCGTC GAGGGCACCA ATCTGCGCGC CTGGCTGTTC
ACCATTTTGC GCAATATCTA TTATTCCGAA TATCGCAAAA GGCGGCGTGA GGTGGCCGAT
TCCGATGGGG CGATCGCGGC CAAACTGGCG ACGGCGCCAG CCCAGAACGG TCATATGGAT
CTGCTCGATT TCCGCGAGGC GCTCCAGCAA TTGCCGCATG ACCAGCGCGA AGCCCTGATT
TTGATTGGCG CCTCTGGCCT TTCCTACGAG GAAGCCGCCA ATATTTGCGG CTGCGCCGTC
GGAACCATGA AAAGCCGCGT GAACCGGGCG CGGGGCCGGC TTGCCGATCT CCTGTCGATT
TCCTCAGCGG CCGAATTTGG AGATGATGGA GACTGGCAAG CCGCCGATCC GAGCCTCATT
GGCCAGCATT ATTCCCGCGC CGGCAACGAT TGA
 
Protein sequence
MASRQMTSDL IAVIPNLRAF AVSLCGNLDR ADDLVQETLV KAWSNLDSFV EGTNLRAWLF 
TILRNIYYSE YRKRRREVAD SDGAIAAKLA TAPAQNGHMD LLDFREALQQ LPHDQREALI
LIGASGLSYE EAANICGCAV GTMKSRVNRA RGRLADLLSI SSAAEFGDDG DWQAADPSLI
GQHYSRAGND