Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3231 |
Symbol | |
ID | 6198830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 3674493 |
End bp | 3675944 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641707180 |
Product | TolC family type I secretion outer membrane protein |
Protein accession | YP_001834280 |
Protein GI | 182680134 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCTT TGCATTCCTT GAAAGTGAAG ACCTGGGACA AGAGGGAGGC CTGTCATCAA TCGGCTTTCC ATCGCTCTGT CTTTCTGGGC GGCGTGCTGC TTATTCTGAG TTCGGGCATC TCGGGCGTGA AGAGCGAGAC GATGTCGAGC GCTTTGGCCA ATGCCTATGC CACCAATCCG GACGTGAATC AGCAGCGTGC CTCCTTGCGC GCGACCGACG AATCGTTGCC GCAGGCCTTG GCGCTCGGGC GGCCGTCGAT CATGGGAAGC GGACAATATG GTTTCAACCA TCGCTTTTCG AGTCTACCCG GTCGAAACGG CGCATTTGGT GGTCTCTTCA ATAACGATAT CGGCTATGTG AATGGTTCAC TGAACCAGAA TATTTTCAAC GGCAATCAAA CCGTGAATAG TGTTCGCCAG GCGGAATCGA CAATTCTCGG CGGGCGCGAA ACATTGCGCA ATACCGAGCA GAGTGTTCTG CAAAACGGCG CCACCGCTTA TATGGATGTC CTGCGCGATA CCGCCGTTCT CGAATTACGC CGCAACAATA TCATTGTTCT CATGGAACAA TTGCGCCAGA CGCGCTACCG TTTCAACGTC GGGGACGTCA CGCGGACCGA TGTGGCGCAA GCGGAATCGA GCTTGGAAAC CGCGCGTTCG GATTATTTTA CCGCCCAGGC CAATCTGCAG ACGAGCATCG CCAATTTCCG GCAGGTTATC GGCCGCCAGC CCAAGCAGCT TGAGGCGGCC GCGACGGTCG AGAAATTGCT GCCGTCCAAT CTCGACACGG CAATCAGTGT TGCGCTCCTC GAGCATCCCT CGATCCAGGA GGCTCTCCAC AATGTGGATG CGGCGGCCGC GCAAGTGAAG ATCATTGAAG GCCAGCTTTA TCCAAAGGTC GATCTCAACG CCACGACGCA AAGAACCTTC AATGTTAATG GCATGACCGG CTATCAGCAG TACAATGGAA CGATCCAGGG GCAGATGTCC GTGCCGATTT ATGAAAATGG CGGCACGACT TATTCCCGTA TTCGCCAGGC CAAGGAGCAA GTGACTCAGG CGCGACTTCA GGCGGATCTC CAGAAAACCA ATGTGCGCGC GGCTCTCGTC TCGGCCTGGG GCCAGCTCAC GACGGCGCGG GCGACCATTG AATCCTCGAT GGCCGCGGTC AAGGCTTCGG AAATTGCGCT TGAAGGCGTG CGTGTGGAGG CCCAGGTCGG TCAACGCACA ACGCTCGACG TGTTGAATGC CCAGCAAACT CTTTTGGGCA ATCGGGTTGC GCTCGTCACG GCGCAGCGCG ATCGCGTCGT TGCCTCCTAT GTGGTCATGG CGGCCATGGG GAAATTGACG GCCACCAATC TGCACCTCGC TGTGGTGCAT TACGATCCGA GCGTGCATTT CGATCAGGTC AAGGACAAGT GGGTGGGCGT GCGCACACCT GACGGGCGGT GA
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Protein sequence | MRALHSLKVK TWDKREACHQ SAFHRSVFLG GVLLILSSGI SGVKSETMSS ALANAYATNP DVNQQRASLR ATDESLPQAL ALGRPSIMGS GQYGFNHRFS SLPGRNGAFG GLFNNDIGYV NGSLNQNIFN GNQTVNSVRQ AESTILGGRE TLRNTEQSVL QNGATAYMDV LRDTAVLELR RNNIIVLMEQ LRQTRYRFNV GDVTRTDVAQ AESSLETARS DYFTAQANLQ TSIANFRQVI GRQPKQLEAA ATVEKLLPSN LDTAISVALL EHPSIQEALH NVDAAAAQVK IIEGQLYPKV DLNATTQRTF NVNGMTGYQQ YNGTIQGQMS VPIYENGGTT YSRIRQAKEQ VTQARLQADL QKTNVRAALV SAWGQLTTAR ATIESSMAAV KASEIALEGV RVEAQVGQRT TLDVLNAQQT LLGNRVALVT AQRDRVVASY VVMAAMGKLT ATNLHLAVVH YDPSVHFDQV KDKWVGVRTP DGR
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