| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3156 |
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| Symbol | |
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| ID | 6201551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 3600459 |
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| End bp | 3602447 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641707104 |
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| Product | squalene-hopene cyclase |
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| Protein accession | YP_001834206 |
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| Protein GI | 182680060 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCAGAAG AGGCCATCCT CACCGAGACT CATCCGCTTG ACGCGACCAC CATCGAAACG
GCCATTACCC GCGCCCGGAA AGCGCTTCTC GGGGAGCAAC GGGCCGACGG TCATTTCGTC
TTCGAGCTCG AAGCGGATGT CTCGATCCCT TGCGAATATA TTCTGTTCTA TCATTTCATC
GGCCGGCCCG CGCCGGCCGA ACTCGAAGCC AAGATTGGCC ACTATCTGCG TGCCCGCCAG
TCAGCCGAAC ATGACGGCTG GCCTTTGTTT CAAGATGGCG CCTTCAATAT TTCGAGCAGT
GTCAAAGCCT ATTTCGCCCT GAAGGCGATC GGCGACACGC CGGACATGCC GCATATGCAA
AGGGCCCGCA CCGCCATTCT GGCGCATGGC GGTGCTGCTG CCGCCAATGT TTTCACGCGC
TCCTTGCTCG CTCTGTTCGG CCTGATCCCC TGGCATGGCA TTCCCGTCAT GCCTATCGAG
ATCATGCATC TGCCGGAATG GTTTCCCTTC CACATCGCGA AAATCTCCTA TTGGGGCCGC
ACCGTTCTGG TGCCGATGAT GGTGGTGCAT GCCCTGAAGC CAAAACCGGC CAATACGTGC
ACGATCCGCA TCGACGAACT CTTCGTGATT CCTCCCGATC AGGTCCGTCA TTGGCCGGGC
AGCCCCGGCA AGCGTTTCCC CTGGACCGCG ATCTTCGCCG GAATCGACAA GGTGCTGCAA
ATCGCCGAGC CATATTTTCC GCGCCGCTCG CGCCAGAGCG CGATCGACAA GGCGGTGGCT
TTCGTCACCA AAAGGCTGAA CGGAGAGGAC GGGCTTGGCG CCATCTACCC CGCCATGGCC
TATTCGGCCT TGATGTATCT CTCGATCGGC AGGTCTTTAA GTGATCCGCA CATTCAACTG
GTCCTGAAGG CCATCGATAA ATTGGTCGTG GTCAAGGATC ATGAGGCCTA TGTCCAGCCT
TGCGTCTCCC CGGTCTGGGA CACGGCTCTG GCCAGCCACG CTTTGATGGA AGCAGGCGAC
GGCGACAAAC CGATTCTCGA TTCCCTCAAG AAGGGGCTCG CTTGGCTGAA GCCTTTGCAA
GTCACCGATA TAGCCGGGGA TTGGGCCTGG AAGAAACCCG ATGTCAAACC GGGCGGCTGG
GCCTTTCAAT ATGGCAATGC CTATTATCCC GATCTCGATG ATACCGCTGT TGTGGTCATG
GCCATGGATC GCGCCCGCGA CCGCTGGCCC GAAATCGACG AGGACAATTT CCGCCCCTCG
ATCGCCCGCG CGCGGGAGTG GATCGTCGGT CTCCAAAGCG AAAATGGCGG CTTTGGCGCC
TTCGATGCCG ACAATGATCG CGATTATCTG AACGCCATTC CCTTCGCCGA TCATGGCGCT
CTGCTCGATC CGCCGACCGC CGATGTGACG GCACGCTGCA TTTCCATGCT GACCCAGCTC
GGCGAAAAGC CGGAAAACAG CGAAACCTTG CGCCGCGCCA TTGCCTATCT TTTCGCCGAG
CAGGAGAAGG ATGGGAGTTG GTTCGGCCGC TGGGGCCTGA ATTATATCTA TGGCACCTGG
TCGGTGCTTT GCTCTCTCAA TGCGGCTGGC ATTGCGCATG ATGCCCCCGA GGTCCGCCGG
GCCGTTGCCT GGCTGCGGAC CATTCAGAAC GAGGATGGCG GCTGGGGCGA GGATGCCGAA
AGCTATGCGC TCGATTATGC GGGCTATCAG CAAGCGCCGA GCACATCCTC GCAGACCGCC
TGGGCCGTGC TCGGCCTGAT GGCCGCAGGC GAGAAGGATG ATCCAGCCGT GGCACGCGGC
ATTGCTTATC TGACACGGAC ACAGGGAGAG GACGGTTTCT GGACGGAAAA GCGCTTCACG
GCGACCGGCT TCCCGCGTGT CTTCTATCTT CGCTACCACG GTTATTCGAA ATTTTTCCCG
CTCTGGGCCA TGGCGCGATA CCGCAATCTG CACAACGGCA ACCATGCCTC CGTGCTGACG
GGAATGTAG
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| Protein sequence | MPEEAILTET HPLDATTIET AITRARKALL GEQRADGHFV FELEADVSIP CEYILFYHFI
GRPAPAELEA KIGHYLRARQ SAEHDGWPLF QDGAFNISSS VKAYFALKAI GDTPDMPHMQ
RARTAILAHG GAAAANVFTR SLLALFGLIP WHGIPVMPIE IMHLPEWFPF HIAKISYWGR
TVLVPMMVVH ALKPKPANTC TIRIDELFVI PPDQVRHWPG SPGKRFPWTA IFAGIDKVLQ
IAEPYFPRRS RQSAIDKAVA FVTKRLNGED GLGAIYPAMA YSALMYLSIG RSLSDPHIQL
VLKAIDKLVV VKDHEAYVQP CVSPVWDTAL ASHALMEAGD GDKPILDSLK KGLAWLKPLQ
VTDIAGDWAW KKPDVKPGGW AFQYGNAYYP DLDDTAVVVM AMDRARDRWP EIDEDNFRPS
IARAREWIVG LQSENGGFGA FDADNDRDYL NAIPFADHGA LLDPPTADVT ARCISMLTQL
GEKPENSETL RRAIAYLFAE QEKDGSWFGR WGLNYIYGTW SVLCSLNAAG IAHDAPEVRR
AVAWLRTIQN EDGGWGEDAE SYALDYAGYQ QAPSTSSQTA WAVLGLMAAG EKDDPAVARG
IAYLTRTQGE DGFWTEKRFT ATGFPRVFYL RYHGYSKFFP LWAMARYRNL HNGNHASVLT
GM
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