Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3103 |
Symbol | |
ID | 6200640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 3549103 |
End bp | 3549672 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641707051 |
Product | HNH endonuclease |
Protein accession | YP_001834153 |
Protein GI | 182680007 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.220092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACGGTTC ACTTCCAACC TCTCGTCTCG CCCGAGGCTT GCCCAGCCCT CGTGCTCAAT GCCGATTTTC GGCCCCTCAG CTATTATCCC CTGTCGCTCT GGTCGTGGCA GGATGCCATT AAAGCGGTCT TCCTCGATCG GGTGAATATC GTTTCCCATT ACGATAAGAC AGTCCGAAGT CCGAGCTTCG AGATGCGGCT GCCTTCCGTT GTTTCCCTCA AAACCTATGT CAAACCTTCG CGTCATCCCG CCTTTACGCG ATTCAATGTT TTCCTCCGCG ATCGCTTTAC CTGCCAATAT TGCGGTTCAC GCGAGGATCT GACTTTCGAT CATGTTCTGC CGCGCTCCAA AGGCGGCACC ACGACCTGGG AAAATGTCGT CGCCGCCTGT TCCTGCTGCA ATCTGCGCAA GGGCGATAAA CTTCCCGACG AGGCCCATAT GTGGCCGGCG AGCCCCCCCT ATCAGCCGAC CGTCGGCGAT CTGCACCAGA ACGGCCGCCA ATTCCCGCCC AATTATCTGC ATGAAAGCTG GATGGATTAT CTCTACTGGG ATTCCGTTTT GGAGCCTTGA
|
Protein sequence | MTVHFQPLVS PEACPALVLN ADFRPLSYYP LSLWSWQDAI KAVFLDRVNI VSHYDKTVRS PSFEMRLPSV VSLKTYVKPS RHPAFTRFNV FLRDRFTCQY CGSREDLTFD HVLPRSKGGT TTWENVVAAC SCCNLRKGDK LPDEAHMWPA SPPYQPTVGD LHQNGRQFPP NYLHESWMDY LYWDSVLEP
|
| |