| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2998 |
|---|
| Symbol | |
|---|
| ID | 6198305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 3407421 |
|---|
| End bp | 3408803 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641706942 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001834051 |
|---|
| Protein GI | 182679905 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.605804 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCTA TCCTAATTGT CGATGATGAT GATGCGATGC GTGACGCGCT GAGCGAAGCT
GCGCGCGATC TCGGCTATGA TGCACACTTG GCGGCGTCGG GAGCGGAGGC GATAAGCCTC
CTCCATGCGC AGGCGATCGA CGCCGCGCTG CTCGATCTTC GCATGCCCGG CATGGAAGGG
ATCGAGGTTC TGAAGCGTCT CCGCGCGCTC CCAAATCCGC CTCCCGTGAC GGTATTGACC
GCCCACGCGA CTGCCGCGAA CACGATCGAA GCGATGCGGC TCGGCGCGTT CGATCATCTG
ACGAAGCCAA TCGGACGAGA GGAAGTGTCG CGCATATTGG CGGGAATGCT TGCGGCTAGA
GCGGCGCCAC GTGCATTCCG GTCGGAGCCA GAACCAGGCG GGTTGATCGG GTCGAGCGAG
CCGATGCGAA CCGTCCAGAA GACCATCGGC ATGCTCGCCG ACAGCAATGC GACCGTGCTC
ATCTCAGGTG AGACGGGGAC CGGCAAGGAG CTGGTGGCGC GTGCCATTCA CGAGCACGGC
CATCGGAGCA GCAGGCCGTT CATTCCCGTC AATTGCGCCG CGATTCCGGC CGAGCTCATG
GAGAGCGAGC TGTTCGGTCA TGTCCGCGGC GCGTTTACGG GCGCCGTAAC CGATCGGAAA
GGCGCGTTTC GCGAAGCCGA GCGGGGTACT CTGTTTCTCG ACGAGATCGG CGACATGGAA
ATTGCCCTGC AAGCGAAGAT CTTGCGGGCG CTACAGGAGC GTGTTGTTAC ACCCGTCGGC
GGCAAGGCCA TTCCCGTCGA TGTTCGCGTG ATCGCAGCGA CCCATCGGGA TCTAAAGCAG
CGCGTGCGAG ATGGCAGTTT CAGGGAGGAT TTGTTCTATC GGTTGCACGT CGTGCCGATC
CATTTGCCAG CTCTACGAGA GCGCATCGCC GACATCGTTC CTCTCGCCGA GTATTTCTTG
GCGCGCGCCG GCGGCGCCAA GCAACTTGCG CCGGAGGCCG CGGCGCGGCT CGTCCGCCAT
GCCTGGCCCG GAAATGTGCG CGAATTGAAG AATGCGATGG AGCGCGCTGC GGCGCTAGTG
CGCAGTGATG CGGTCAACTC CGTCGATCTC GACTTTATCG ATGAGACTCG CTCGGCAACC
GATCGAGCAA TTGATTGGCC GGATGAAGAT CTGCCGTCGG CCACCTCTCG GCTCGAGGAG
ATGCTGATTC GCCGCGCTCT AGCAAGGAGT GAAGGCAATC GGGCGGAAGC GGCGCGCCTG
CTCGGCATCC ACCGGCAGCT TCTCTATACG AAGATGAAGC GCTATGGCCT CGACGCGTCC
GAAGACCGGA CGCAACGTGT CGGGGAAGCG GACATTCCGA CGGGCCAGCC GTCTAAAAAA
TAA
|
|---|
| Protein sequence | MASILIVDDD DAMRDALSEA ARDLGYDAHL AASGAEAISL LHAQAIDAAL LDLRMPGMEG
IEVLKRLRAL PNPPPVTVLT AHATAANTIE AMRLGAFDHL TKPIGREEVS RILAGMLAAR
AAPRAFRSEP EPGGLIGSSE PMRTVQKTIG MLADSNATVL ISGETGTGKE LVARAIHEHG
HRSSRPFIPV NCAAIPAELM ESELFGHVRG AFTGAVTDRK GAFREAERGT LFLDEIGDME
IALQAKILRA LQERVVTPVG GKAIPVDVRV IAATHRDLKQ RVRDGSFRED LFYRLHVVPI
HLPALRERIA DIVPLAEYFL ARAGGAKQLA PEAAARLVRH AWPGNVRELK NAMERAAALV
RSDAVNSVDL DFIDETRSAT DRAIDWPDED LPSATSRLEE MLIRRALARS EGNRAEAARL
LGIHRQLLYT KMKRYGLDAS EDRTQRVGEA DIPTGQPSKK
|
|---|
| |