Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2877 |
Symbol | |
ID | 6198341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 3284263 |
End bp | 3285570 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641706824 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001833935 |
Protein GI | 182679789 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.200442 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGG CATTCTCTAA GGTTGAAGAC GCGCCGCGCA AGACGGGCGC TGCTGGGCAT GAGGATTACC CTATGCCGTC GAAAAAGATC TTCGTCGTGG TTCTTCTGCT GGTTGGCGGC GCTCTGGCCT ATGGCGCCTA TGGCCATTGG CGGCGCAGCG TCGAAGCGGC TGAGACCCAG GAGAAGACGA TCAATTTCGT GCCGAAGGTC CGGGTCCAGG ACGTCAAGCT GCTTGATGAG CCAGTCCGAT TGAAATTGCC CGGGCAGACC GTCGCCTTCA ATACGGCGTC TCTTTATGCC CGCGCCACCG GCTACATTGC CGAACGGCAT GTGGACATCG GCAGCCGCGT CAAAAAAGGT GATTTGCTCG TACGCATCGC TTCTCCCGAT CTCGATCGGC AGCTTGATCA AGCCGAGGCG CAATTGAAGC AGGTCGAGGC GGCTCTGGCG CAGGCGCAGG CACAGGTCGA TCAGGCCGAG GCCAATGTGC GTCTCGCCAA TGTGACGTAT TCCCGTGCGG ACGCTTTGAC CAAGCGCGGT TATGAAACAT TGCAGACCCG GGACAATCAG CAGGCCAATG TCTCGGTGCA GCAGGCGACA TTGGAGACCG CACATGCGGG GGTCAAATTG GCTCAAGCCA ATGTGCAGGC GCAAAAGGCG ACGGTTGATC GATTGCGGAC ACTGACCGCC TTTGAACAGG TGGTGGCCCC ATTCGATGGC GTCATCACGG CGCGCAACGT CGAGGTTGGG GATCTTGTCA ATGCCGATAA TGGCAATGGC ACGCCGATGT TCTCCATCAA CCATGACGAC GTTTTGCGCG TGGCGGTCAA TGTTCCGCAG AGCTCGGCGA TTGGGGTGAC GGAAGGGCTG ACCGCCGAGG TTCAAGTGCC GCAAATGCCG CAGCGTGTAT TCACCGGCAA GGTGGCGCGC AGTTCGGTGG CGTTGACTGC GTCCTCACGC ACACTCTCGA CGGAAATCGA TGTCATCAAT AAGGATGGTG CTTTGCGTCC AGGCCTTTTT GTCGATGTGA CCTTCGCTGT CCCGCGTACC CATCCCAATG TCGTCGTGCC CTCCGAAGCT CTCATCTTCA ATCAGCATGG TTTGCATGTG GCCGTGCTGG GTCCTGATAA TCGGATTGTT CTACGCCCTG TGACGATCTA TCGGGATTTT GGGCAAACTG TTGAATTAAA TGATGGTTTG GAAGGTCACG AGAAAATCGT GTTGAGTCCG CCGGCGATTC TCGCTGATGG GAGCAAGGTG GATGTCGTGC CGAATGAGAA CGAAAAACAG GCATCTGCCA CTCCGTGA
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Protein sequence | MSEAFSKVED APRKTGAAGH EDYPMPSKKI FVVVLLLVGG ALAYGAYGHW RRSVEAAETQ EKTINFVPKV RVQDVKLLDE PVRLKLPGQT VAFNTASLYA RATGYIAERH VDIGSRVKKG DLLVRIASPD LDRQLDQAEA QLKQVEAALA QAQAQVDQAE ANVRLANVTY SRADALTKRG YETLQTRDNQ QANVSVQQAT LETAHAGVKL AQANVQAQKA TVDRLRTLTA FEQVVAPFDG VITARNVEVG DLVNADNGNG TPMFSINHDD VLRVAVNVPQ SSAIGVTEGL TAEVQVPQMP QRVFTGKVAR SSVALTASSR TLSTEIDVIN KDGALRPGLF VDVTFAVPRT HPNVVVPSEA LIFNQHGLHV AVLGPDNRIV LRPVTIYRDF GQTVELNDGL EGHEKIVLSP PAILADGSKV DVVPNENEKQ ASATP
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