Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2861 |
Symbol | |
ID | 6200527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 3264953 |
End bp | 3265882 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641706808 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001833919 |
Protein GI | 182679773 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00405542 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGG TGTTAATGAG TGCCGTGGCG ATTGTTGCTC TCATGACGGC TCAAGCGTCT GCTAAAGAGT TGAAATCTAT TGGGCTTTCG CTCGGCTCCA TGGGCAATCC CTTTTTTGTT GCAATGGCCA AGGGTGCGGC AGCGAGTGCT CAGAAAATCA ATCCGAATGC CAAGGTGACA GCGCTAGGTT TCGATTATGA CCTGAATAAG CAATTCACGC AGATCGATAA TTTCATCGCC TCCGGCGTTG ATCTGATTCT GCTCAACCCC GGTGACCCTG TGGCTCTGGA GCCAGCGATC AAACGCGCCC AAGCGGCGGG TATCCCTGTC ATCGCGGTCG ATACAGCTGC CAAGGGCGCC GATATCGTGA TCACCACGGA CAATACGCAG GCTGGTGAAA TTTCCTGCCA ATATATTGTG GATAAGCTCG GCGGCAAAGG TGATGTCATC ATCGAGAACG GTCCGCAGGT GTCTTCCGTG CGCGAGCGTG TGGCCGGTTG CAAGAAGGCG CTGAGTAATG CGCCAGGCAT CAAAATCCTT TCAAGTGATC AAGATGCTAA AGGATCGCGT GATCAAGGCT TGAACGTGAT GCAGGGCTAT CTCACCCGCT TCCCCAAGAT CGACGCGGTC TTCACGATCA ATGATCCGCA AGCGATCGGC TCCGATCTCG CTGTTAAACA GCTTCATCGT GACCAGATTA TGATTACGTC GGTTGATGGT GCACCCGATA TCGAAGTCGC TCTCAAAGCA AATACACATA TTCATGCTTC TGCAAGCCAG GACCCTTATG CAATCGCACA ACTTGCGGTC AAGCTTGGGA GTGAGTTGCT GAATGGTAAC AAGCCCGAAC AGAATGTGAT TCTGATTCCC TCCAAACTTG TGACACGTGA TAATGTCGCC GAATATAAAG GCTGGCAGGC TGAGCGTTGA
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Protein sequence | MKKVLMSAVA IVALMTAQAS AKELKSIGLS LGSMGNPFFV AMAKGAAASA QKINPNAKVT ALGFDYDLNK QFTQIDNFIA SGVDLILLNP GDPVALEPAI KRAQAAGIPV IAVDTAAKGA DIVITTDNTQ AGEISCQYIV DKLGGKGDVI IENGPQVSSV RERVAGCKKA LSNAPGIKIL SSDQDAKGSR DQGLNVMQGY LTRFPKIDAV FTINDPQAIG SDLAVKQLHR DQIMITSVDG APDIEVALKA NTHIHASASQ DPYAIAQLAV KLGSELLNGN KPEQNVILIP SKLVTRDNVA EYKGWQAER
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