Gene Bind_2507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_2507 
Symbol 
ID6201037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp2860299 
End bp2861018 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content63% 
IMG OID641706488 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001833603 
Protein GI182679457 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID[TIGR03541] LuxR family transcriptional regulatory, chaperone HchA-associated 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.883175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.509717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCG CACCGGTCGA GGCTGCCTTT AATACCGCCC TCGCTATCGA GGGCGGTGAT 
AGCCTGTCCG TGATTCAAGA CAGGATTCGC GCCTTTGCCG GACCGCTCGG TTATGACCGC
TTCGTTCTGT TCACCGCTTC GGCGGCGCGG GAGGACGTGG TCGAGCGGAT TTACTGGGTC
GAGGGTGACT GGTTTGGCAC AGGCGAGGCC GTAGACGCCC TCACCTATAT CCGGCGCTGC
CCGGTCAACC GTCATATTCT CGAAGTGAGC GAGCCGTTCT TCTGGACCAA AACCAGGAGT
GAGAGTGGGG AATTGTATCA GGTGGTCCGC ACGCCGCGGG GTCGCGGTGT TCATGGCCTG
CAGATACCGA TCTTCGGCCC GTCTGGATTG GAAGGCGCGA TGAGCCTTGG CGGAGAGCGC
ATCGACGCTT CTCCGCAAGC GCGGCTGGCC CTGTCGCTGG TGGGAACCGC GGCATTTCTC
TCGGCACGCC GGCTGCTGGA GGCGCCTAAC AGCAGTGCGA CCGCAAAGCT GTCACATCGT
GAACGCGAGA TTCTGGCGTG GACGGCTGCG GGACGGCGGC AGGCGGATAT CGCCGCAACA
CTCGGACTTT CGGAACGCAC GGTCGAGAAT CACCTGCGCC GGATCCGCAG ACGCCTGGCC
GTCATGACAA CGGCTCAGGC AATACGGGTC GCGATCCGAA ACGGCGACAT TGAAAGCTGA
 
Protein sequence
MSSAPVEAAF NTALAIEGGD SLSVIQDRIR AFAGPLGYDR FVLFTASAAR EDVVERIYWV 
EGDWFGTGEA VDALTYIRRC PVNRHILEVS EPFFWTKTRS ESGELYQVVR TPRGRGVHGL
QIPIFGPSGL EGAMSLGGER IDASPQARLA LSLVGTAAFL SARRLLEAPN SSATAKLSHR
EREILAWTAA GRRQADIAAT LGLSERTVEN HLRRIRRRLA VMTTAQAIRV AIRNGDIES