Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2486 |
Symbol | |
ID | 6200085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 2838321 |
End bp | 2839850 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641706467 |
Product | sugar transporter |
Protein accession | YP_001833582 |
Protein GI | 182679436 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.625827 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAGTG AGACGCGCGG CGGAGGATCT TCCCGTCCGG GTGTGGATGA AGCGGTTTCC GCTTCAAAGC CCAATCCTTT CGCAGATCGC ATATTGATGG TTGCCGGACT TACGGCTGCT GTGTGCGGAG GGCTCTACGG CTACGATACC GGGATCATCT CCGGTGCGTT GTTCTCCATG ACCCGGGAGT TCGACCTCTC GCACCAGATG CAGGAAACCG TCGCAGCGTC TATCCTTGCT GGCGCCGTGC TTGGTGCTCT GATCACCAGC TGGTTCTCTG AACGTTACGG CCGCAAGGCG ACCGTGCTAA TCGTGGCCGG TTTGTTCGCA GTCGGCGCCG GCGCATGCGC TCTCGCTCCG AAGGTCGGAT CATTGATTGC TGCCCGGCTC TTCCTGGGAT TTGCTGTCGG CGGATCGACT CAGGTGGTCC CCATGTATAT TTCAGAGCTC GCCCCTCCAG AACGGCGCGG CCAGCTCGTT ACGATGTTCA ACGTCGCCAT CGGCATCGGG ATCGTCATCG CGAACCTGGT TGGCTATGGG TTGCGCGACA GCTGGACCTG GCGAGAGATG GTGGCTGTGG CAGCGGTCCC CGCAGCCATC GTTTTCTTCG TCATGCTGTT CATGCCCAGC AGCCCACGTT GGATTGCCGA ACGCCGACGC CTGGGCGAAG CCGCCAAAAT CCTCCAGTCG ATCCGGACGT CACACGCAGA GATTCGCGAT GAATTGAACC AGATTTATGA TGTTTCTAAT GCCGCGGCTC AGGAGGATGC TGGCTGGAAG GGCATTTGCA AACCTTGGGT TCGCCCCGCA TTGATCGCGG CGCTGGGCGT GGCATTCTTT ACGCAATGCG GCGGGCTAGA GATGATGATC TATTATTCGC CGACATTCTT GGCGGATGCA GGCTTCGGCC GGAACTCCGC TTTGCTCGCC AGCGTGGGGG TCGCGCTGGT CTACGCCTTG GTGACCTTTC TGGGATGCCT CTTCGTCGAC CGGATCGGGC GCCGGCGCCT CATGCTGATC ATGATTCCCG GTTCGGTCAT CAGCCTCATC GGCCTCGGCA TTATGTTCGC TTTCGGCCGA CATGAAGGCT GGGAGGCAAC CCTCACAGTC GTCTTTCTTC TCCTCTTCAT GATGTTCAAC TCCGCCGGCA TTCAGATCTG CGGCTGGCTG CTCGGCTCGG AGATGTTCCC TCTGGCGATG CGTGGACCAG CGACAGCGCT CCACGCGGCC ATGCTGTGGG GAAGCAACCT CCTCGTCACC GGAACCGCGC TGTCCGTCGT CAACGCCGTC GGACTCGGCG CTACAATGTG GATCTATGCC GCAGTCAATC TCGCGTCGCT TGTGTTCGTC TATTTCTTCG TGCCGGAAAC CGCAGGTGCA TCCCTTGAAG ACATTGAGGG TGCTCTGCGT GAGGGACGCT TTAAACCAAG CCGCACCAGC TCTTCGGTGT TACGAATTGC CGCCAACAGC GAGCCGATGT TCATAACCAA ACCCGAGCCT GGTGTTGCTC CTTTGAAGGT GGTTGAATGA
|
Protein sequence | MISETRGGGS SRPGVDEAVS ASKPNPFADR ILMVAGLTAA VCGGLYGYDT GIISGALFSM TREFDLSHQM QETVAASILA GAVLGALITS WFSERYGRKA TVLIVAGLFA VGAGACALAP KVGSLIAARL FLGFAVGGST QVVPMYISEL APPERRGQLV TMFNVAIGIG IVIANLVGYG LRDSWTWREM VAVAAVPAAI VFFVMLFMPS SPRWIAERRR LGEAAKILQS IRTSHAEIRD ELNQIYDVSN AAAQEDAGWK GICKPWVRPA LIAALGVAFF TQCGGLEMMI YYSPTFLADA GFGRNSALLA SVGVALVYAL VTFLGCLFVD RIGRRRLMLI MIPGSVISLI GLGIMFAFGR HEGWEATLTV VFLLLFMMFN SAGIQICGWL LGSEMFPLAM RGPATALHAA MLWGSNLLVT GTALSVVNAV GLGATMWIYA AVNLASLVFV YFFVPETAGA SLEDIEGALR EGRFKPSRTS SSVLRIAANS EPMFITKPEP GVAPLKVVE
|
| |