| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2166 |
|---|
| Symbol | |
|---|
| ID | 6198706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 2472223 |
|---|
| End bp | 2473236 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641706155 |
|---|
| Product | glycine oxidase ThiO |
|---|
| Protein accession | YP_001833275 |
|---|
| Protein GI | 182679129 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.232699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.765835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATTC GCATTATCGG CGCCGGAATC ATGGGATTGA CGACGGCTTT CGAATTTGCC
TCCCACGGGG CGGATGTCGA AGTCGTCGAA CAGCGTGATG GCCCCGGCAA GGGCTGTTCT
TTCCTCGCTG GCGGCATGAT CGCGCCCTGG TGCGAGGTCG AAAGCGCCGA ACCCATTGTC
GGCACTATGG GGCTCGAGGC ACTGCGGTTC TGGACCGAAG ATGTACCGGT GGCGACGCGT
CAAGGAAGCC TAGTCCTTGC CCCGCCACGC GACCGGCCGG AACTTGCCCG TTTCTCTCGC
CTTACCAGCC ATTATGAACG GATGGACGGC GCGGCGCTCG CCGCGCTCGA GCCTGATCTC
GAAGGGCGTT TTGGCGAGGC GCTTTTCTTT CCCGAAGAAG CCCATCTTGA TCCACGCCAA
GCCACGGCGG CCTTGGGTGA GCGATTGGCG GCAGCGCCCA ATGTCATTTT GCGTTACGGC
ACCGAAGCCG AAGACCTGTC CGAAGCGGGT GCTGACTGGA TCATCGATTG CCGTGGCCTT
GCCGGGCGGG ATGCCTTGCC CGATTTGCGC GGGGTCAAGG GCGAAATGCT GGTTCTGCGG
ACGGGGGATA TCAGACTCGC AAGGCCCATC CGGCTTCTGC ATCCGCGTTT TCCGGTCTAT
ATCGTGCCGC GCGGCGACGG CCGTTTCATG ATCGGCGCCA CCTCGATCGA AAACGAGGAA
GAGGGGCGGA TCACGGCCCG TTCCATGGTT GAACTTCTGA GCGCGGCCAT GACCGTGCAT
CCGGCCTTTG GAGAGGCGGA AATCATCGAA ACCGGGGCCG GTTTGCGTCC GGCCTTTCCC
AATAATCTGC CACGCCTGCG GGTTGAGGGT CATGTCGTTC GGGCCAATGG TCTTTATCGG
CATGGTTTTC TTCTGGCGCC CCCCGTGGCG CGCAGGATCA GGCGCATGGT TCTTGAAGGC
GCTTCTTTTC CGGAGGTCAT GGATGCAGAT CCGCGTGAAC GGCAAAGAGC TTGA
|
|---|
| Protein sequence | MRIRIIGAGI MGLTTAFEFA SHGADVEVVE QRDGPGKGCS FLAGGMIAPW CEVESAEPIV
GTMGLEALRF WTEDVPVATR QGSLVLAPPR DRPELARFSR LTSHYERMDG AALAALEPDL
EGRFGEALFF PEEAHLDPRQ ATAALGERLA AAPNVILRYG TEAEDLSEAG ADWIIDCRGL
AGRDALPDLR GVKGEMLVLR TGDIRLARPI RLLHPRFPVY IVPRGDGRFM IGATSIENEE
EGRITARSMV ELLSAAMTVH PAFGEAEIIE TGAGLRPAFP NNLPRLRVEG HVVRANGLYR
HGFLLAPPVA RRIRRMVLEG ASFPEVMDAD PRERQRA
|
|---|
| |