| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2163 |
|---|
| Symbol | |
|---|
| ID | 6198589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 2470619 |
|---|
| End bp | 2471224 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641706152 |
|---|
| Product | thiamine-phosphate pyrophosphorylase |
|---|
| Protein accession | YP_001833272 |
|---|
| Protein GI | 182679126 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.460146 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATC CCTTTTATCT TATCGTCGAT AATGCCGCCT GGCTCGCGCG ATTGCTGCCC
TGCGGCGTCA AGCTGGTGCA ATTGCGGGTC AAGGACCTGA CCGGCGAGCC TTTGCGCGCG
GAAATCGCCA AGGCCAGAAC CTTGTGCGAT ACGCATGGGG CCCAATTGAT CGTCAATGAT
TATTGGGTCG AGGCGATCGA TCTCGGCTGC GATTATGTGC ATCTCGGCCA GGGCGATCTC
GACACCGCCG ATCTCCCCGC GATCCGCCGC GCGGGACTGC GGCTCGGCCT CTCCACACAT
GATGAAAAAG AGCTGGAACG GGCCTTGGCC TGCGCGCCGG ATTATATCGC GCTCGGGCCG
ATCTATCCGA CGATTTTGAA AGCCATGCCT TTCGCGCCGC AAGGCTTGGC GCGTCTCGGT
GAATGGAAAC GCAAGATCGG CTCCATTCCC CTCGTCGGCA TCGGTGGCAT CAATCTCGAC
CGCGTGGCGG GCGTGCTGGA AGCCGGTGCG GATAGTGCCT CTGTTGTGAC CGATATCAGC
CTAAATCCGG ATCCTGAACA AAGGACACGC GATTGGCTGG CCGCGACACG CCGCTTCGTG
GCGTGA
|
|---|
| Protein sequence | MLDPFYLIVD NAAWLARLLP CGVKLVQLRV KDLTGEPLRA EIAKARTLCD THGAQLIVND
YWVEAIDLGC DYVHLGQGDL DTADLPAIRR AGLRLGLSTH DEKELERALA CAPDYIALGP
IYPTILKAMP FAPQGLARLG EWKRKIGSIP LVGIGGINLD RVAGVLEAGA DSASVVTDIS
LNPDPEQRTR DWLAATRRFV A
|
|---|
| |