Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2009 |
Symbol | |
ID | 6199526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 2295915 |
End bp | 2297141 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641705996 |
Product | major facilitator transporter |
Protein accession | YP_001833120 |
Protein GI | 182678974 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.40621 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCATGC CCTCTCCCTC TCAGCCGAGC GATCGGACCA TTCAACGCGC ACTTGCAGCA CTTGCCATCG GCTCTTTTTG CATCGGGACC AGCGAATATG TCATCATGGG GCTTCTGCCG GATATAGCCC GCGATCTTGA TGTCACGATT CCGCAGGCTG GCGTTCTGGT CAGCGCCTAT GCCTTGAGCG TTGCCTTCGG CTCGCCCTTT TTGGCGATTG CCACCGCGCG CATGGATCGC CGGAACGCCA TGCTCGTTCT GGCGAGTGTC TTCATCCTCG GCAACGTGCT CTGTGCCCTG GCGCCAACCT ATGGGCTCTT GATGGGTGCA CGTATTGTGA CGGCCCTCTG CCACGGCGCT TTTTTCGGCA TCGGCGCGGT GGTTGCGGCC GCGCTCGTGC CGCCTCATAA AAAGGGCCAA GCCATTGCCA TGATGTTCGG TGGCCTCACC GTTGCCAATG TCCTTGGCGT CCCCTTCGGC ACCGCGCTTG GCGAGACCCT GAATTGGCGC GAAACCTTCT GGTGTGTCGC CGTGGTCGGC CTGGTGGCTA TCGTAACGCT CTATCGTTGG CTGCCGCGCA ACATTCCCGT ACCGCCAATG CAGCTCGCAC GTGAGGCACG CTCACTTGGC CACCCGCAAG TGATCCTGGC CATGCTGATC AGCATCCTGA CTTCGGCGAG CTTGTTCAGT GTCTTTACCT ATATCACGCC AATCCTTGAA AACGTGACAG GCCTGTCTCC CCACGTTGTG ACACTCATTT TGTTTTTGTT CGGTGTCGGT GTAACCTGCG GCAATTTCTT GGGTGGACGC CTGGGCGATT GGAAGCTGAT GCCCTCTGTC ATCGGCATAC TCGCTTTGCT CATTCCCCTG CTCTGCCTGT TCCGCATGAC GAGTTCAGAG GCGCTGCCTG CCGCCATAAC GGTCTTTTGT TGGGGTCTGC TCGCTTTCGC GATGGTTCCA CCCTTACAGA TGCGCGTTGT CGATGAAGCC CGAGAGGCCC CCAACCTCGC ATCGACCCTT AATCAAGGAG CTTTCAATTT CGGCAATGCT ATTGGCGCAT GGATCGGAGG TCTGCTCCTC ACACAGGGCC TTTCCTACGC CCAATTGCCC TGGGTTGGGA TGACAATCGC AATCATCGCG ACCCTCTTCG CCATGCTTTC GCATTGGCTG GACGGCCGGG CGGTGCCAGT GACCGGCTTC GCCCATGCCA CATCGCAAGA ACGATGA
|
Protein sequence | MSMPSPSQPS DRTIQRALAA LAIGSFCIGT SEYVIMGLLP DIARDLDVTI PQAGVLVSAY ALSVAFGSPF LAIATARMDR RNAMLVLASV FILGNVLCAL APTYGLLMGA RIVTALCHGA FFGIGAVVAA ALVPPHKKGQ AIAMMFGGLT VANVLGVPFG TALGETLNWR ETFWCVAVVG LVAIVTLYRW LPRNIPVPPM QLAREARSLG HPQVILAMLI SILTSASLFS VFTYITPILE NVTGLSPHVV TLILFLFGVG VTCGNFLGGR LGDWKLMPSV IGILALLIPL LCLFRMTSSE ALPAAITVFC WGLLAFAMVP PLQMRVVDEA REAPNLASTL NQGAFNFGNA IGAWIGGLLL TQGLSYAQLP WVGMTIAIIA TLFAMLSHWL DGRAVPVTGF AHATSQER
|
| |