Gene Bind_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_2009 
Symbol 
ID6199526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp2295915 
End bp2297141 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content59% 
IMG OID641705996 
Productmajor facilitator transporter 
Protein accessionYP_001833120 
Protein GI182678974 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.40621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGC CCTCTCCCTC TCAGCCGAGC GATCGGACCA TTCAACGCGC ACTTGCAGCA 
CTTGCCATCG GCTCTTTTTG CATCGGGACC AGCGAATATG TCATCATGGG GCTTCTGCCG
GATATAGCCC GCGATCTTGA TGTCACGATT CCGCAGGCTG GCGTTCTGGT CAGCGCCTAT
GCCTTGAGCG TTGCCTTCGG CTCGCCCTTT TTGGCGATTG CCACCGCGCG CATGGATCGC
CGGAACGCCA TGCTCGTTCT GGCGAGTGTC TTCATCCTCG GCAACGTGCT CTGTGCCCTG
GCGCCAACCT ATGGGCTCTT GATGGGTGCA CGTATTGTGA CGGCCCTCTG CCACGGCGCT
TTTTTCGGCA TCGGCGCGGT GGTTGCGGCC GCGCTCGTGC CGCCTCATAA AAAGGGCCAA
GCCATTGCCA TGATGTTCGG TGGCCTCACC GTTGCCAATG TCCTTGGCGT CCCCTTCGGC
ACCGCGCTTG GCGAGACCCT GAATTGGCGC GAAACCTTCT GGTGTGTCGC CGTGGTCGGC
CTGGTGGCTA TCGTAACGCT CTATCGTTGG CTGCCGCGCA ACATTCCCGT ACCGCCAATG
CAGCTCGCAC GTGAGGCACG CTCACTTGGC CACCCGCAAG TGATCCTGGC CATGCTGATC
AGCATCCTGA CTTCGGCGAG CTTGTTCAGT GTCTTTACCT ATATCACGCC AATCCTTGAA
AACGTGACAG GCCTGTCTCC CCACGTTGTG ACACTCATTT TGTTTTTGTT CGGTGTCGGT
GTAACCTGCG GCAATTTCTT GGGTGGACGC CTGGGCGATT GGAAGCTGAT GCCCTCTGTC
ATCGGCATAC TCGCTTTGCT CATTCCCCTG CTCTGCCTGT TCCGCATGAC GAGTTCAGAG
GCGCTGCCTG CCGCCATAAC GGTCTTTTGT TGGGGTCTGC TCGCTTTCGC GATGGTTCCA
CCCTTACAGA TGCGCGTTGT CGATGAAGCC CGAGAGGCCC CCAACCTCGC ATCGACCCTT
AATCAAGGAG CTTTCAATTT CGGCAATGCT ATTGGCGCAT GGATCGGAGG TCTGCTCCTC
ACACAGGGCC TTTCCTACGC CCAATTGCCC TGGGTTGGGA TGACAATCGC AATCATCGCG
ACCCTCTTCG CCATGCTTTC GCATTGGCTG GACGGCCGGG CGGTGCCAGT GACCGGCTTC
GCCCATGCCA CATCGCAAGA ACGATGA
 
Protein sequence
MSMPSPSQPS DRTIQRALAA LAIGSFCIGT SEYVIMGLLP DIARDLDVTI PQAGVLVSAY 
ALSVAFGSPF LAIATARMDR RNAMLVLASV FILGNVLCAL APTYGLLMGA RIVTALCHGA
FFGIGAVVAA ALVPPHKKGQ AIAMMFGGLT VANVLGVPFG TALGETLNWR ETFWCVAVVG
LVAIVTLYRW LPRNIPVPPM QLAREARSLG HPQVILAMLI SILTSASLFS VFTYITPILE
NVTGLSPHVV TLILFLFGVG VTCGNFLGGR LGDWKLMPSV IGILALLIPL LCLFRMTSSE
ALPAAITVFC WGLLAFAMVP PLQMRVVDEA REAPNLASTL NQGAFNFGNA IGAWIGGLLL
TQGLSYAQLP WVGMTIAIIA TLFAMLSHWL DGRAVPVTGF AHATSQER