| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1983 |
|---|
| Symbol | |
|---|
| ID | 6198546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 2264942 |
|---|
| End bp | 2267485 |
|---|
| Gene Length | 2544 bp |
|---|
| Protein Length | 847 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641705971 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001833095 |
|---|
| Protein GI | 182678949 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.138459 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATT TCAAAATGCC GGTTCCGATG AAACGCTCCG GCATATCCGG CATGATCTTG
CTGTTGTTGA CTGTTTTCGT GACAGTGATG GCCGCTTTGT CCTTGCTGCC ACGCGAGATG
GCTGCCGGTC TCGCTGTCTG GTGCCTGGCC CTCTTCGCGG TGGTCGGCCT TCTCGCGCTT
TATGCCTATG CTTGCGGTTG GTTGCGCATT GCGGGACTGA AGCCGGACTT GCACCTGAGC
CGTTTGATTT GCGACGAAAG TACCGATGGG CTCGTCGTGA CTGATGTGGA AGGATCGCTT
CTCTACGGTA ATGCGGCTTA TGAGGCCTTG GTCGGCCCTC TGGATTTGTG GCGTGGGCCG
GCGGTCGAGC GGCGGTTCGC TGACGTGCCG GAAATCAGGG AGGCGATCTA TCGCCTGGCT
CAGGCGGGTC GGCAAGGCCG GGCAGGGTTA GAGGAATTGC GACTCAGCCC TGCGCTCATG
GGGGGCGCGC CTTTTGGCTG GTATCGGATT GCCGTGCGCC CCCTGTTTTT GAAAGAGGCG
CGACCGGCGA CGCTCTGGAG ATTCACCGAT ATTACGCGCG AGCGGGAGCA ACAGGAAAAG
CTCTTTGGCG AATGGCGTCG TGCTATTGCT TTTCTCGATC AAGCGCCAGC GGGCTTTTTT
TCTTCCGATC GGGACGGACG GATCACCTTT TTGAATGCCA CGCTGGCGAC ATGGCTCGAT
TATGATGTGA CGCCGCGCGA GACGGAAGAG ATCGCGCTTT TTCAATTGGA TGGACGAGAG
ACGCGATCAG GTGGCCTCGC GCTCGGGGAT TTGATGGCTG GCGATGGGGC CAATGTGCTC
GGCGCCAAGA AAGGTGCGCC GGGGGAAGTG CGTTGTGAAC AATTGGATCT CGATCTGAAA
CGGCGTGAAG GCCGGAGCCT GCCCGTGCGG CTCTTGCACC GGATCGCCTT CGGCGAGGAT
GGACGGCCAG AGACATCCTG CACCCTTGTT CTCAATCGGG CGGCGAATGA AGAACCGGCA
GAGGGTCTGC GGGGAAACGA GACTCGTTTC GCACGCGTGT TCGATACCAC TCCGATCGCT
ATGGCGATCG TCGATCGCTC CGGCCAGCTC CTGCGGTCCA ATGCTGCTTT CGCTCGTTTC
ATGCCGGAGG CTCTCGATCG AAACGGCAAA AATCCACCTC GCGCGCTCCA GGCCTCGATT
ATCGAGCCTG ATCGTGCGGG GCTCGATGAA GCGATTCAGG CAGCGGCGCG GTCGGGAGGC
GATATTCCAC CGGTCGATGT CACGTTTGTC GGCGCGGAAG AACGCTCAGC CAGATTGTTT
GTCGCGAGCG CGAATGAAGG ACAAGGCGGC GCGATGATCT ACGCGCTGGA TACGACTGAA
TTGCGGACCT TGCAGAATAA TTTCGCGCAA TCGCAGAAAA TGCAGGCGAT TGGTCAGCTC
GCCGGTGGCG TAGCGCATGA TTTCAACAAT GTGTTGACTG CCATCATCGG CTATTCGGAT
CTTCTGCTTG CCAATCAGCG TCCGACTGAT CCCTCCTTCC AGGATATTAT GCAGATCAAG
CAGAACGCCA ATCGGGCGGC GGGCCTAGTG CGTCAATTGC TGGCTTTCTC ACGCCGGCAG
ACCTTGCGCC CGCAAGTGCT CCAGCTTGGT GATGTTCTCT CCGATCTGCA AATGCTGCTG
CGCCGCCTCG TCGGGGAGAC AATCGAACTT GATCTACGGC ATGGCCGCGA CCTCTGGCTC
GTCAAGGCCG ATCTCAATCA GTTCGAACAA GTCATCGTCA ATCTCGTCGT CAATGCGCGT
GACGCCATGC CGGACGGCGG ACGGATTGCC TTGCGCACGC GCAATATCGA ACCTGAAGCC
TGCGCCGCTT TCAGTGAAAA AACGGTACGG CCCGCCGAAT ATGTCCTGAT CGAGGTGGAA
GATAATGGTC AGGGCATTCC CATCGACGTC AAGGATAAGA TTTTTGAACC CTTCTTCACC
ACCAAGGAAG TTGGAAAGGG GACGGGGCTA GGGCTGGCCA TGGTCTATGG CATCGTCAAG
CAAACGGGAG GCACTGTCTT TTGTGATAGT GTCTTGGGTG TCGGCACGAC CTTTTCGATC
CTATTGCCGC GATACAAGGA GGAGCATTCA GCCGAAGCCC CGGTGGTGGA GGCGCCAAAG
CCCGCCGCCG ATCTTACCGG TCGGGGAACG ATCCTGCTCG TCGAAGATGA GGAAGCCGTG
CGCGCTTTTG GCGCGCGGGC TCTGACCTCA CGTGGTTATA CCGTGCTACA GGCAGGTTCC
GGCTTAGAGG CGTTGGAAGT CGTCGAACAG AATGAGGGCA AGATTGATCT CGTCGTTTCC
GATGTCGTGA TGCCGGAGAT GGATGGTCCC ACAATGTTCG GTGAATTGCG TAAGCGGGGC
GTCATGGCCA AGGTCATTTT TGTGTCCGGC TATGCCGAGG AGGCTTTCGC CAAAAATCTG
CCGGAGGGAC AAGAATTTGC GTTTCTACCG AAGCCTTTCT CCCTGAAACA ATTGATCGAA
GCGGTGAAAG GGCAAACGAC CTGA
|
|---|
| Protein sequence | MTDFKMPVPM KRSGISGMIL LLLTVFVTVM AALSLLPREM AAGLAVWCLA LFAVVGLLAL
YAYACGWLRI AGLKPDLHLS RLICDESTDG LVVTDVEGSL LYGNAAYEAL VGPLDLWRGP
AVERRFADVP EIREAIYRLA QAGRQGRAGL EELRLSPALM GGAPFGWYRI AVRPLFLKEA
RPATLWRFTD ITREREQQEK LFGEWRRAIA FLDQAPAGFF SSDRDGRITF LNATLATWLD
YDVTPRETEE IALFQLDGRE TRSGGLALGD LMAGDGANVL GAKKGAPGEV RCEQLDLDLK
RREGRSLPVR LLHRIAFGED GRPETSCTLV LNRAANEEPA EGLRGNETRF ARVFDTTPIA
MAIVDRSGQL LRSNAAFARF MPEALDRNGK NPPRALQASI IEPDRAGLDE AIQAAARSGG
DIPPVDVTFV GAEERSARLF VASANEGQGG AMIYALDTTE LRTLQNNFAQ SQKMQAIGQL
AGGVAHDFNN VLTAIIGYSD LLLANQRPTD PSFQDIMQIK QNANRAAGLV RQLLAFSRRQ
TLRPQVLQLG DVLSDLQMLL RRLVGETIEL DLRHGRDLWL VKADLNQFEQ VIVNLVVNAR
DAMPDGGRIA LRTRNIEPEA CAAFSEKTVR PAEYVLIEVE DNGQGIPIDV KDKIFEPFFT
TKEVGKGTGL GLAMVYGIVK QTGGTVFCDS VLGVGTTFSI LLPRYKEEHS AEAPVVEAPK
PAADLTGRGT ILLVEDEEAV RAFGARALTS RGYTVLQAGS GLEALEVVEQ NEGKIDLVVS
DVVMPEMDGP TMFGELRKRG VMAKVIFVSG YAEEAFAKNL PEGQEFAFLP KPFSLKQLIE
AVKGQTT
|
|---|
| |