Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1904 |
Symbol | ispH |
ID | 6199867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 2172525 |
End bp | 2173484 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641705893 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_001833017 |
Protein GI | 182678871 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA AGCCGAAACT GCATATTCTT CTTTGCGCAC CGCGCGGATT TTGTGCCGGC GTCGTGCGGG CCATTGATGC GGTCGAACAG GCTTTGCGCC TGTACGGAGC GCCGGTCTAT GTACGCCATG AGATCGTCCA CAATAAATTC GTGGTCGAGG GATTGAAGGC AAAGGGAGCA ATCTTCGTCG AGGAGCTGGA CGAGGTTCCA GATACGGATA AGCCCGTGAT CTTCTCGGCT CATGGCGTGC CGAAATCCAT CCCCGCGGAA GCACAGAGCC GCAATATTTT CGCGATTGAT GCGACCTGCC CGCTGGTGAC AAAAGTGCAT CGTGAGGCGG AACTCCACCA CAATAATGGC CGCCAGGTGC TGCTCGTCGG CCATGCCGGT CACCCTGAAG TCGTTGGCAC ATTGGGCCAA TTGCCGGAAG GCTCGATCCT GCTGGTGCAG ACGCCGGGTG AGATCGAAAC TTTGCAGGTC AAGGACGAGA AAAACCTCGC CTATGTCACG CAGACCACGC TTTCGGTCGA TGACACAAGA AATATGGTCG AAGCACTGAC CAAGCGTTTC CCCGAGATTA TCGGGCCGCA CCGTGAGGAC ATTTGCTATG CGACGACCAA TCGGCAGGAG GCGGTGAAGC GCATCGCGCC AATCGTCGAT GCGCTGCTTG TCGTCGGCTC CTCCAATTCC TCCAATTCAC AAAGGCTGCG GGAAGTCGCC GAACGCTCGG GCTGCAAGCT CGCTCGTCTG GTGCTGCGTG CCGACGATGT GGAATGGGAT TTGTTCTCGA ATATTTCCTC GCTTGGCATT ACGGCTGGCG CCTCGGCCCC GGAAGTGCTC GTCGAGGAAA TCATGGCCGC CTTCGCCGAG CGTTTCGAGC TCGAGGTCGA GACTGTCTCG ACCGCCGATG AAGGTGTCTT CTTCCCGCTC CCGCGTGAAT TGCGTCAGGC GGCGTCTTGA
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Protein sequence | MTDKPKLHIL LCAPRGFCAG VVRAIDAVEQ ALRLYGAPVY VRHEIVHNKF VVEGLKAKGA IFVEELDEVP DTDKPVIFSA HGVPKSIPAE AQSRNIFAID ATCPLVTKVH REAELHHNNG RQVLLVGHAG HPEVVGTLGQ LPEGSILLVQ TPGEIETLQV KDEKNLAYVT QTTLSVDDTR NMVEALTKRF PEIIGPHRED ICYATTNRQE AVKRIAPIVD ALLVVGSSNS SNSQRLREVA ERSGCKLARL VLRADDVEWD LFSNISSLGI TAGASAPEVL VEEIMAAFAE RFELEVETVS TADEGVFFPL PRELRQAAS
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