| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1796 |
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| Symbol | |
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| ID | 6200493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 2034418 |
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| End bp | 2035737 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641705786 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_001832913 |
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| Protein GI | 182678767 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.401704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCAGA CAAGACAAGA GTCGCCCCGG CAAGAACAGG AGAATGTATA TCGCGAGGGC
ACCGCAGGGG CCACGCGTCC TTTCGCGCCC TTCGAGTGGA TGATCGCCTT GCGTTACCTG
CGCGCACGCC GCTCGCAGGG ATTCGTTTCG GTCATTGCCG GCTTTTCCTT TCTCGGCATT
ACACTTGGCG TGGCGACGCT CATCGTCGTC ATGTCAGTGA TGAATGGATT CCACAAGGAA
TTGCTCGACA AGATCGTCGG TATCAACGGC CATATCTTTC TCCAGGCGAC GGAATCGCCC
CTGACCGATT ATGAATCCGT TGTCCACCAG ATCGATGGCC TGCCGGGCAT CGAACTCGCG
CTTCCCCTCG TCGAGGCGCC GGCGGCGGCC TCGACCACCA ATATGGCCTT TGCCCTTGTG
CGCGGCATCC GTGAGGTTGA TCTGAAACGC CTGCCAGGCA TTGCTGGCCA TGTGACGCTC
GGGACATTGG ACGGGTTCGA TAAAGCGGGG GGTGTCGTCA TCGGCCAGAG GCTCGCGGAG
AATCTTGGGC TCGGCCTTGG CGACAAGATC AAGCTTCTGA CCGCCAATGG CACGCAGACG
CCCTTTGGTG TGACGCCCCG CAGCAAGGTC TATACGGTTA CGGGCATTTT CCAGATCGGC
ATGGCTGAAT TCGACAATCT CTTCGTCTAT CTTCCCTTGC CGGAGGCACA GGCCTTCTTC
AACAAGGAGG GCGAGGCGAG TGTTATCGAA ATTTTCCTGA CGGATCCTGA TCGGATTGAT
GCCGCGCGCC ACGTGCTGCA AGACCATATC ACCCGGCCGA TGATCATGAC CGATTGGCGT
GAGCGTAACC GCACCTTCTT TGACGCGCTG AATGTCGAAC GCAATGTCAT GTTCATCATT
CTGACGCTCA TCGTGCTCGT CGCGGCCTTG AACATCATTT CCGGCCTGAT CATGCTGGTG
AAGGACAAGG GACGCGATAT TGCGATCCTG CGGACCATGG GCGTGACTCG CGGTGGCGTC
ATGCGGATCT TTCTCATCAC CGGCGCCTCG ATTGGCATCG TTGGAACCTT TGCAGGCTTC
CTGTTGGGCC TGCTCGTCGC CAGCAATGTC GAGGCGATCC GCCAGATGTT GAACCGTCTG
CTCGACGCCA ATCTGTTTCC CGCCGAGATC TATTTTCTGT CACGCTTGCC GTCCGTGGTC
GATCCCGGTG ATGTCTTTTC GGTGGTCGCG CTGACGCTCG TTCTCTCCGT GCTTGCCACG
CTCTATCCGT CCTGGCGGGC GGCGCGTCTC GACCCGGTCG AAGCCTTGCG TTACGAATGA
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| Protein sequence | MTQTRQESPR QEQENVYREG TAGATRPFAP FEWMIALRYL RARRSQGFVS VIAGFSFLGI
TLGVATLIVV MSVMNGFHKE LLDKIVGING HIFLQATESP LTDYESVVHQ IDGLPGIELA
LPLVEAPAAA STTNMAFALV RGIREVDLKR LPGIAGHVTL GTLDGFDKAG GVVIGQRLAE
NLGLGLGDKI KLLTANGTQT PFGVTPRSKV YTVTGIFQIG MAEFDNLFVY LPLPEAQAFF
NKEGEASVIE IFLTDPDRID AARHVLQDHI TRPMIMTDWR ERNRTFFDAL NVERNVMFII
LTLIVLVAAL NIISGLIMLV KDKGRDIAIL RTMGVTRGGV MRIFLITGAS IGIVGTFAGF
LLGLLVASNV EAIRQMLNRL LDANLFPAEI YFLSRLPSVV DPGDVFSVVA LTLVLSVLAT
LYPSWRAARL DPVEALRYE
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