Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1719 |
Symbol | |
ID | 6200624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1943108 |
End bp | 1943872 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641705710 |
Product | GntR domain-containing protein |
Protein accession | YP_001832838 |
Protein GI | 182678692 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.938764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00929417 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGGCGT TGATCCAGCC GATCCGGCTC GCCGATAAAA TCGCGCAATA TATCGAACGG CTTATTCTGG AAGGCGTTTT GCGTGCCGGG GAAAGATTGA GCTCCGAGCG TGACCTTGCC GAAAAGCTCG GTGTCTCGCG GCCTTCCCTG CGCGATGGGA TCGCACGGCT CGAACAAAGG GGATTATTGG TGACGACAAA GGCCGGAACT TTCGTGGCGG ATTTCATGGC ACCATTGTCC GAACCCCTCG CCGCATTATT CAGCAACGAA CCGCGTATGT TGAAGGATTA TTTCGAATTT CGCCGTTTGC TCGAAGGACA GGGAGCAGCG TTCGCGGCCG AACGCGCGAC GGATATCGAT CGAGAAAAGA TCAGTGCCTG CCTTGAGCAC ATGCGTGTTT TGCATGAACT GGATGATCCA CGCGACGAGG CTCAGCAGGA TGTCGATCTG CATATCCTGA TTTACGAGGC GACGCATAAT CTCGTTTTAC AGCATACGAT GCGCATGTTC TCGGATATGC TGAAAAAAGG GATCTTCTAC AGCAGGATCA GGCTCTACGA ACGTCCCGAA GTCCGAGCCG CCATGCTGGA ACAACATATT TCATTGGCGA CGGCCATTCT CGAAGGTCGA CCGCGAGAGG CCGAAGCGGC GGCCCATGCG CATATCGATT ATACCGCACG CGCCACGGCC ATCATGGCTG AGGAAGACGA GCGCCTTGCG GCTTCCCAGC TCCGCCTGAA TCGTGAGGAT CTCGTTGCTG AATAG
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Protein sequence | MTALIQPIRL ADKIAQYIER LILEGVLRAG ERLSSERDLA EKLGVSRPSL RDGIARLEQR GLLVTTKAGT FVADFMAPLS EPLAALFSNE PRMLKDYFEF RRLLEGQGAA FAAERATDID REKISACLEH MRVLHELDDP RDEAQQDVDL HILIYEATHN LVLQHTMRMF SDMLKKGIFY SRIRLYERPE VRAAMLEQHI SLATAILEGR PREAEAAAHA HIDYTARATA IMAEEDERLA ASQLRLNRED LVAE
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