Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1602 |
Symbol | |
ID | 6199807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1807404 |
End bp | 1808414 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641705593 |
Product | cationic amino acid ABC transporter, periplasmic binding protein |
Protein accession | YP_001832723 |
Protein GI | 182678577 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.499841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.998345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCAAAT CCATCGTTTC CGCGGGCCTG TTCAGCCTCT GCGTGACGAC CGGCGCCCTC GCCGGCACAC TCGACGAAGT CAAGGGACGC GGTTTCCTGA ATTGTGGCTC CAACCCCGGT CTCGCGGGCT TCGGCCTGCC GGACGACAAG GGTCAATGGG TCGGTTTCGA TATCGATTTC TGCCGTGCCG TCGCGGCGGC GATTTTCGAT GATCCCACCA AGGTCAAATT CCTGCCGCTC AGCGGCAAGG ATCGTTTCAC CGCGCTGCAA TCAGGCGAAA TCGATATTCT CTCGCGGAAT ACGACCTGGA CCCAATCCCG CGAAGTGGGG CAGGGGTTCC TGTTTACCGG CATTACCTAT TATGACGGTC AGGGTTTTAT GACCCATCGC AAGCTCAACC TGACGTCCGC GCTTGAACTT GCTGGAGCCT CGATCTGTGT TCAGCAGGGA ACGACGACGG AACTCAATCT CGCCGATTTC TTCCGCGCCA ATAATCTGCA GTATGAGCCA GTGAATTTCG CGACTGGCGA TGAAGCCCTG AAAGCCTATG ATACCGGCCG TTGCGATGCT CTGACCACGG ATGCATCCGG CCTTTACGCC CAGCGCGCCA AACTCGCCAA TCCGGATGAT CATGTCGTTC TGCCCGAAAT CATCTCCAAG GAGCCGCTCG GCCCCCTGGT GCGTCAAGGC GACGATCAAT GGTTCAACCT TGTGAAATGG GTGCATTTCG CCTGGCTCAA CGCCGAGGAA GACGGCGTGA CCTCGAAAAA CCTGGACGAG AAGACGAAAT CGGAAAGTCC GGAGATCAAG CGCCTGCTCG GTTTCGAAGG CAATTTCGGC GAAGGACTCG GCCTGACGCG CGACTGGATC TATCGCATCA TCAAACATGT CGGCAATTAT GGCGAGGTTT TCGACCGCAA TCTCGGCGAA GGCTCGAAAC TGAAAATCAA GCGCGGCATC AACAATCTCT GGACGAAGGG CGGATTGCAT TATGCGCCGC CGGTCCGCTG A
|
Protein sequence | MFKSIVSAGL FSLCVTTGAL AGTLDEVKGR GFLNCGSNPG LAGFGLPDDK GQWVGFDIDF CRAVAAAIFD DPTKVKFLPL SGKDRFTALQ SGEIDILSRN TTWTQSREVG QGFLFTGITY YDGQGFMTHR KLNLTSALEL AGASICVQQG TTTELNLADF FRANNLQYEP VNFATGDEAL KAYDTGRCDA LTTDASGLYA QRAKLANPDD HVVLPEIISK EPLGPLVRQG DDQWFNLVKW VHFAWLNAEE DGVTSKNLDE KTKSESPEIK RLLGFEGNFG EGLGLTRDWI YRIIKHVGNY GEVFDRNLGE GSKLKIKRGI NNLWTKGGLH YAPPVR
|
| |