| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1520 |
|---|
| Symbol | |
|---|
| ID | 6199112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 1720870 |
|---|
| End bp | 1723143 |
|---|
| Gene Length | 2274 bp |
|---|
| Protein Length | 757 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641705509 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001832642 |
|---|
| Protein GI | 182678496 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.203555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0623449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATC TCGACGTAAC GCATCATGCT CCAGCCTCCG GCGCTTCCAA ACTCGAGCGC
CGCTGGACGA CCCCGCTTGG CGCCTCCTTC GTCCTTCTGG CGCTGGTGAC CGCGCTCAGC
AGCTTTCTGA TCTTCGCCGG CTATACGCCG ATCCCGGTGA ATGACACGAT CGTCCTCAGC
CTGTTCGTCG CCAATATCGC CAGCATTCTC CTTCTCTTCG GCCTCGTTCT CGTTGAAGCC
TACAGGCTTT ATGCCGCCTG GCGCAGCAAG GTCGCGGGCG CGCGGCTGCA TTTGCGGATC
GTCGCTCTAT TCTCGATCGT CGCGGCGGCG CCGGCCTTGC TCATGGCCTG GGTCGGTTCG
GTTACCCTGG AACGCAGTCT CAACCCGTCC TTCATGCAGG ATGTGCGAGG CTTCGTGCTC
AATACGATCG ATGCGGCGCG GCTGTTCCGC GAGGGTCAGT GCAAGGCCTT GCTGCAAGAA
GCTTCCTTGA CCGCGGCCGA TCTCGATCGC GCCAAAACCG TGATGTTCGA GGGACACCGC
GAATTGTTTC GCGATTTCTT TGCCTCGCGG GCGAAATTCC TGGGCTTTAC CGCCGCGGCG
CTCATGAAAT CCGATGGCCA GATCGTGGAG AGGATCGATA CTCATGCGGC TATGGGCACG
GCGGTGGTGC AGCCGGAACC AAGCGACTTC GAGGATGCTC GCAAGAACGA GCCTTTGTGC
CTGATCCTCG ACGAGGGTGG GACCTTTGTC GCCTTACGGC CGGTTTCGGG ATTTCCTGAT
ACATTTCTCT ATGTCGCTCG GCCGGTCGAT CGTTTCACCG TCGCCTTCCC GCGCGAGGCT
TCCAAGCTCG TTGCGATTTA TGATGCCTTC GACAGCCACC GGCGCGGCAT TCAGATCGCC
TTTGCCGCCA TGTTCGTCTC GATCGCGCTG ATCATGGTTC TAGCGGCAAC CTGGCTCGGC
CTTTCTTTCG CCAATCAGCT CGTCGCACCG ATCCGCCGAC TGATCGCCGC GACCGACCAG
GTCGCTTCCG GCAATCTGTC CGTTCAGGTC GCGGTCTATC GTGACGAGGG GGATCTCGCC
CGGCTTGGCG AGACCTTCAA CAAGATGATC GCGGAATTGC GTCTGCAGCA AAATCGATTG
ATCGCCGCCA GCAATCTGAT CGATGAAAGG CGTTTGTTTA CCGAGGCGGT GCTGTCCGGC
GTGCCGGTCG CCGTGGTTGG CATCGGTCCA AAGGGCCTGG TTACGGTGCT GAATGCCTCG
GCCGAAAAAC TCGTGCCCAT GGGCGCGGAG GAATTGACCA CCGTGACAGG CCAGCCGGTT
GAGGCTGTGC TGCCGGAAAT CGCGGATCTG TTCAATGAGG CGCGGGCCAG TACGATGCGG
CTGATGCAGG GTCAGATCAG CCTTGATCGT GGCGGCCGTG ATCGGCTTTT CAATGTCAGC
ATCACATCCG AGCCGACCGC GCGGACCGAT AAAAGCTATG TTGTGACGCT CGACGATATT
ACCGATCTCG TGACGGCCCA GCGCACTGCC GCCTGGGCGG ATGTCGCCCG CAGAATTGCT
CACGAAATCA AAAATCCCCT GACACCGATC CAGCTTTCGG CGGAACGCCT GAAACGCAAA
TATGGACGCG TGATTGTCCA GGATCGCGAT ATTTTCGATC AATGCATCGA TACGATCGTG
CGGCAGGTCG ATGACATCAA ACGCATGGTC GATGAATTTT CTTCCTTCGC ACGGATGCCC
AAGGCCAAAC TTGATTCCGA TGATCTGACT GATTGCCTGC GCCGCGTCCT GTTTCTCATG
CGCGTGGCGC ATCCGGACAT CACCTTCGAT GAGGATTTGC CGGAGAAATC CGTCATCGGC
CGCTTCGACA GGCGGCTTTT GTCCCAGGCC GTGACCAATA TTCTTAAAAA CGCTGCCGAA
GGCATAGCAG CCGTAGCGGA AACAGAGCAG GGTAACCGGG CGCCGGGCCG CATCCTCCTC
AGGCTTCTCG TGCGCGGTGA TCAAGCGGAA ATCGATATTA TCGATAATGG CAAGGGTTTC
CCGCGCGAAA ACCGGCACCG TCTGCTCGAG CCCTATATGA CGACTCGCGC CGAGGGGACA
GGACTTGGCC TGCCGATTGT CGCCAAGATT CTGGAGGATC ACGGCGGATC TCTCGAACTC
CTGGATGCGC CTGATGGACA GGGCGCCTTC GTCAAACTGC TTCTGCCACT TGGCGGAGCT
CAGGAAAAGG AACCACGCGC GCCGGTTGCG CTTCTCTCGA TGAACGAGGA ATGA
|
|---|
| Protein sequence | MPDLDVTHHA PASGASKLER RWTTPLGASF VLLALVTALS SFLIFAGYTP IPVNDTIVLS
LFVANIASIL LLFGLVLVEA YRLYAAWRSK VAGARLHLRI VALFSIVAAA PALLMAWVGS
VTLERSLNPS FMQDVRGFVL NTIDAARLFR EGQCKALLQE ASLTAADLDR AKTVMFEGHR
ELFRDFFASR AKFLGFTAAA LMKSDGQIVE RIDTHAAMGT AVVQPEPSDF EDARKNEPLC
LILDEGGTFV ALRPVSGFPD TFLYVARPVD RFTVAFPREA SKLVAIYDAF DSHRRGIQIA
FAAMFVSIAL IMVLAATWLG LSFANQLVAP IRRLIAATDQ VASGNLSVQV AVYRDEGDLA
RLGETFNKMI AELRLQQNRL IAASNLIDER RLFTEAVLSG VPVAVVGIGP KGLVTVLNAS
AEKLVPMGAE ELTTVTGQPV EAVLPEIADL FNEARASTMR LMQGQISLDR GGRDRLFNVS
ITSEPTARTD KSYVVTLDDI TDLVTAQRTA AWADVARRIA HEIKNPLTPI QLSAERLKRK
YGRVIVQDRD IFDQCIDTIV RQVDDIKRMV DEFSSFARMP KAKLDSDDLT DCLRRVLFLM
RVAHPDITFD EDLPEKSVIG RFDRRLLSQA VTNILKNAAE GIAAVAETEQ GNRAPGRILL
RLLVRGDQAE IDIIDNGKGF PRENRHRLLE PYMTTRAEGT GLGLPIVAKI LEDHGGSLEL
LDAPDGQGAF VKLLLPLGGA QEKEPRAPVA LLSMNEE
|
|---|
| |