Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1480 |
Symbol | |
ID | 6198764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1685026 |
End bp | 1685778 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641705470 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001832603 |
Protein GI | 182678457 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.228128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACA GGTTCAACAA CAAGGTTGTA GTGGTGACCG GCGGGACGAG CGGCATCGGC CTGGCCACGG CCAAGGCATT CGCCGCCGAG GGGGCCTCGG TGTTCATTAC CGGGCGTCGG CAGGAGACGC TCGACGTGGC GCTGAAGAAG ATCGGCGGCC GGGTCACGGG CGTTCGTGGC GATATGACCA ATCTGGCCGA CATCGACCGG CTCTATGATG CCGTCCAGCA GAACCACTCC CAGATCGACG TCGTCTTCGC CAATGCCGGC GGCGGCGAGA TGGCACCGCT CGGTGCGATC ACCGAGGAGC ATTACCAGAG TATCTTCGAC ACGAACGTAA AGGGCGTCCT CTTCACCGTG CAGAAGGCTC TGCCGCTCCT GCGCGACGGT GCCTCGGTGA TCCTGACGGG TTCGACCACC AGCATCTCGG GCACGCCTGC CTTCAGCGTC TATTCGGCGA CCAAGGCGGC GGTGCGCAAC TTCGCCCGCA ATTGGATCCT CGACCTCAAG GACCGCCACA TCCGCGTGAA CACGGTCAGT CCAGGCGTCA CCGAGACTGC CGGATTGGAC GAACTGTTCG GCGGCGGCGA CCAGGCGCAG AGCACCAAGG ATTATCTTGC CGGCTTGATT CCGATCGGTC GCATCGGCCA GCCTGAGGAG ATTGCCAAGA CGGTGCTGTT CCTTGCATCC GACGAAGCCA GCTTCGTCAA CGGCATCGAG CTCTTCGTCG ACGGCGGCCA AGCCCAGATC TGA
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Protein sequence | MTDRFNNKVV VVTGGTSGIG LATAKAFAAE GASVFITGRR QETLDVALKK IGGRVTGVRG DMTNLADIDR LYDAVQQNHS QIDVVFANAG GGEMAPLGAI TEEHYQSIFD TNVKGVLFTV QKALPLLRDG ASVILTGSTT SISGTPAFSV YSATKAAVRN FARNWILDLK DRHIRVNTVS PGVTETAGLD ELFGGGDQAQ STKDYLAGLI PIGRIGQPEE IAKTVLFLAS DEASFVNGIE LFVDGGQAQI
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