| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1201 |
|---|
| Symbol | |
|---|
| ID | 6199866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 1394861 |
|---|
| End bp | 1396498 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641705195 |
|---|
| Product | Pyrrolo-quinoline quinone |
|---|
| Protein accession | YP_001832332 |
|---|
| Protein GI | 182678186 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4993] Glucose dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.817213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTTCA AGCAGCGCCT CACACGCCTC TCCGTCGGTT TGAATCGTTT GCTTTTGAGC
GCTGTTCTCG GCGCACCGAT CGGACCCGTC TTCGCACAAG AGACACATCC AAGCGGCCCC
AGTCAGGCGG AACTCGATCA ATCAGCCAAG ACGACGGATA CATGGCTGAT GACCAATAAA
AGCTATGATG GCCATCGCTA TGTTGCTCTC GATCAGATCA ACAAGGATAA TGCCGGTAGC
CTGCACGAGG TCTGTGTCTA TGACAGCGGA ACGACAGGAC CTGCTCAATC CTCACCCGTT
CTCTATGACA ATCACCTGTT CCTCTCCATC GGCCAGACAA CGGTGGCCAT AGACGCCCGA
AACTGCAAGG AAATCTGGCG TTACGAATGG GTCTTGAAGG ACAAGGCTCT GTCCACGCCC
AATCGTGGAG TCGCTATCAA GGATGGCAAG GTAATACGCG GCACATCGGA CGGGTTTTTG
ATCGCGCTTG ACATGAGCGA TGGCAAACTC TTGTGGGAAC GTCAGATCAC CAGCGCGAGC
GATAGTCATT ATCTCAGCAT GCCTGCCATG GTTGTCGAGG ACGCGATCAT CTATGGCACG
GCAGGCGCGG ATTGGGGGTC GCGAGGCTGG ATAGGCGCTT TTTCATTGAA GGATGGCCAA
CAGCTCTGGC GGTTCGAGGC TCTTCCAAAG CCCGGAGAGT CAGGCGCCGA AACCTGGGGC
AAGGGCGAGG CCCTAGCGCA TGGGGGCGGC AGTTTCTGGA CACCCATTTC TATCGATCGC
GCCAACAATC TCGCTTTCGT GCCAATCGGC AATCCCGCGC CGGATTTCTA CGGCGATGCC
CGCAAAGGTG ACAATCTCGA TACCAATGCG CTTGCGGCAC TGGATCTGAA AACCGGCCAA
AAGGTCTGGG CTCACCAATT CGTTCCCCAT GACGAGCATG ATTGGGATCT CAGCCAGACG
AGCCCGCTCG TCAGCGTCGA CATCGAGGGT AAACCGCATA ATCTCATTGT CGTCAGTGGC
AAGGACGGTC GTGTGCGCCT TGTCGATCGC GATACACATG GCATTTTCGC CGATCTCGCC
ATTTCGAAAC AGGAGAATAC AGACATTCCG GTCACGGTCG ATGGCGTACA TATCTGCCCA
GGCCTGCTCG GCGGCCAGGA ATGGAGCAGC TCCGCCTATG ATCCACAGCG CAAGATCACG
ATTTCACCCA TGGTGGATTG GTGCGGCACC GTGCATCACG ACGCCACCGC TCCCATTCAT
CAGGTCGGGC ATCATTTTTA TGGCGGCGGG ATCGATCAGG ACCCGATCGA CCAGGCGCGC
GGCCTCCTCG CCGCGATCGA TGTCACGACC GCCAAGCTGC GCTGGAAAAC CGAATTTCCC
GCCCCCATGC TGGCCAATGT CACGGCCACC AAGGGAGGCG TGATTTTCGC GGGCGATCTC
GGCGGGACGC TCTATGCGGT CGATGCCGAT AAAGGGGATG TGCTTTTACG CCATCCACTC
GGCTCTTCGG CCGGCGCCGG CATGATCACT TATGCACTCG ACGACAAGCA ATATGTTGCC
GCGGTGTCCG GCCGCGTCTC GGCCTTCTTC CCTGGCGGGA CGGGCACGAC GAAGCTCACG
CTTCTGGCGC TGCCGTGA
|
|---|
| Protein sequence | MIFKQRLTRL SVGLNRLLLS AVLGAPIGPV FAQETHPSGP SQAELDQSAK TTDTWLMTNK
SYDGHRYVAL DQINKDNAGS LHEVCVYDSG TTGPAQSSPV LYDNHLFLSI GQTTVAIDAR
NCKEIWRYEW VLKDKALSTP NRGVAIKDGK VIRGTSDGFL IALDMSDGKL LWERQITSAS
DSHYLSMPAM VVEDAIIYGT AGADWGSRGW IGAFSLKDGQ QLWRFEALPK PGESGAETWG
KGEALAHGGG SFWTPISIDR ANNLAFVPIG NPAPDFYGDA RKGDNLDTNA LAALDLKTGQ
KVWAHQFVPH DEHDWDLSQT SPLVSVDIEG KPHNLIVVSG KDGRVRLVDR DTHGIFADLA
ISKQENTDIP VTVDGVHICP GLLGGQEWSS SAYDPQRKIT ISPMVDWCGT VHHDATAPIH
QVGHHFYGGG IDQDPIDQAR GLLAAIDVTT AKLRWKTEFP APMLANVTAT KGGVIFAGDL
GGTLYAVDAD KGDVLLRHPL GSSAGAGMIT YALDDKQYVA AVSGRVSAFF PGGTGTTKLT
LLALP
|
|---|
| |