Gene Bind_1177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1177 
Symbol 
ID6199825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1363316 
End bp1364515 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content57% 
IMG OID641705170 
Productmajor facilitator transporter 
Protein accessionYP_001832308 
Protein GI182678162 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.670552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAG TCGTATCCGG CACGTCCACG CCATGGCTCA CCCGCAATAC GGTCCTACTC 
GCGCTGGCCA GCTTGTTCGC CGATATTGCG ACGGAAATGC TCTATCCCAT TCTACCGGTT
TTTCTGACAC AGACGCTCCT TGCCAGCGGC AGCATCATCG GCCTGATCGA CGGCATAGCG
CAAGCCACGC AAAATATCAT TCAAGGCTTT TCCGGCTGGT TGTCGGATCG ATTGCAGCAA
CGCAAAACCA TCGCGCTGGC TGGTTATTTT CTCGCCGCGA TCTCCAAACC CCTCATCGGT
GCGGCCTCGG CCTGGCCTGC GGTTCTTGTC GCGCGTGTTT TCGATCGTGT TGGCGCGGGA
CTGCGCTCCG CCCCGCGCGA TGCGCTCATT GCCTCTTCCG TCGGAGACGA CCATCGTGGA
AAGGCCTTTG GCCTCGAAGG CATGGGCGAT AATCTTGGCG CTTTTCTCGG GCCTCTGCTC
ACAGTCCTAT TGCTGACGGC CCTCGCCTTC GATCTCCGCT CGATTTTCGC GCTTGCGCTC
GCTCCCGGTC TCCTCGCCTT CGTCATGATT TTATTGGTGC GTGAGCCGCC CTCCGCCGCA
CAGATTGAGG CTAAAGCCAG GATCGATGTC GATCCACGGC AATTTCCCAG AGCTTATTGG
ATCTATCTTT TGGTCACGGC ATTATTTGGC CTCGGCAATT CCAGCAATGC CTTCTTGATC
CTGCAAACTC AGGATGCCGG TGCGTCGCTC GAAACCACCA TTCTGATTTA TGCGGGTTTC
AATCTCGTTG CGGCCCTGAT TTCCTATCCA GCCGGATATT TCTCCGACCT CTGGGGCCGC
AAAACTGTTC TCCTCCTCTG CTTTCTGATT TTTACAATCA CCTATCTCGG CTTCGCCTTG
ACACGGAACA CAGCAGGGCT TGGCCTGCTC TTTATCTTTT ATGGGCTCTA TCAAGGGATC
TTTCGGTCTG TCGGGAAAGC TTTCGCCTCG GATTTCGCGC CGCCGCACCT GCATGCCAGC
GCGATCGGTT GGTACAGCGC CACGATCGGT CTTCTGCAAC TTTTCGCCAG TCTCATGGCC
GGCGTTCTCT GGGATCGCGT CGGCCATCAA GCCGTCTTCT TTTATGGCGC CTTCTTCGCG
GCCATCGGCT CCCTCGCCCT TGCTCTATTG ATCCCTGGCA AAAGCGCTGC CCACAGGTAA
 
Protein sequence
MSQVVSGTST PWLTRNTVLL ALASLFADIA TEMLYPILPV FLTQTLLASG SIIGLIDGIA 
QATQNIIQGF SGWLSDRLQQ RKTIALAGYF LAAISKPLIG AASAWPAVLV ARVFDRVGAG
LRSAPRDALI ASSVGDDHRG KAFGLEGMGD NLGAFLGPLL TVLLLTALAF DLRSIFALAL
APGLLAFVMI LLVREPPSAA QIEAKARIDV DPRQFPRAYW IYLLVTALFG LGNSSNAFLI
LQTQDAGASL ETTILIYAGF NLVAALISYP AGYFSDLWGR KTVLLLCFLI FTITYLGFAL
TRNTAGLGLL FIFYGLYQGI FRSVGKAFAS DFAPPHLHAS AIGWYSATIG LLQLFASLMA
GVLWDRVGHQ AVFFYGAFFA AIGSLALALL IPGKSAAHR