Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1177 |
Symbol | |
ID | 6199825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1363316 |
End bp | 1364515 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641705170 |
Product | major facilitator transporter |
Protein accession | YP_001832308 |
Protein GI | 182678162 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.670552 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCAAG TCGTATCCGG CACGTCCACG CCATGGCTCA CCCGCAATAC GGTCCTACTC GCGCTGGCCA GCTTGTTCGC CGATATTGCG ACGGAAATGC TCTATCCCAT TCTACCGGTT TTTCTGACAC AGACGCTCCT TGCCAGCGGC AGCATCATCG GCCTGATCGA CGGCATAGCG CAAGCCACGC AAAATATCAT TCAAGGCTTT TCCGGCTGGT TGTCGGATCG ATTGCAGCAA CGCAAAACCA TCGCGCTGGC TGGTTATTTT CTCGCCGCGA TCTCCAAACC CCTCATCGGT GCGGCCTCGG CCTGGCCTGC GGTTCTTGTC GCGCGTGTTT TCGATCGTGT TGGCGCGGGA CTGCGCTCCG CCCCGCGCGA TGCGCTCATT GCCTCTTCCG TCGGAGACGA CCATCGTGGA AAGGCCTTTG GCCTCGAAGG CATGGGCGAT AATCTTGGCG CTTTTCTCGG GCCTCTGCTC ACAGTCCTAT TGCTGACGGC CCTCGCCTTC GATCTCCGCT CGATTTTCGC GCTTGCGCTC GCTCCCGGTC TCCTCGCCTT CGTCATGATT TTATTGGTGC GTGAGCCGCC CTCCGCCGCA CAGATTGAGG CTAAAGCCAG GATCGATGTC GATCCACGGC AATTTCCCAG AGCTTATTGG ATCTATCTTT TGGTCACGGC ATTATTTGGC CTCGGCAATT CCAGCAATGC CTTCTTGATC CTGCAAACTC AGGATGCCGG TGCGTCGCTC GAAACCACCA TTCTGATTTA TGCGGGTTTC AATCTCGTTG CGGCCCTGAT TTCCTATCCA GCCGGATATT TCTCCGACCT CTGGGGCCGC AAAACTGTTC TCCTCCTCTG CTTTCTGATT TTTACAATCA CCTATCTCGG CTTCGCCTTG ACACGGAACA CAGCAGGGCT TGGCCTGCTC TTTATCTTTT ATGGGCTCTA TCAAGGGATC TTTCGGTCTG TCGGGAAAGC TTTCGCCTCG GATTTCGCGC CGCCGCACCT GCATGCCAGC GCGATCGGTT GGTACAGCGC CACGATCGGT CTTCTGCAAC TTTTCGCCAG TCTCATGGCC GGCGTTCTCT GGGATCGCGT CGGCCATCAA GCCGTCTTCT TTTATGGCGC CTTCTTCGCG GCCATCGGCT CCCTCGCCCT TGCTCTATTG ATCCCTGGCA AAAGCGCTGC CCACAGGTAA
|
Protein sequence | MSQVVSGTST PWLTRNTVLL ALASLFADIA TEMLYPILPV FLTQTLLASG SIIGLIDGIA QATQNIIQGF SGWLSDRLQQ RKTIALAGYF LAAISKPLIG AASAWPAVLV ARVFDRVGAG LRSAPRDALI ASSVGDDHRG KAFGLEGMGD NLGAFLGPLL TVLLLTALAF DLRSIFALAL APGLLAFVMI LLVREPPSAA QIEAKARIDV DPRQFPRAYW IYLLVTALFG LGNSSNAFLI LQTQDAGASL ETTILIYAGF NLVAALISYP AGYFSDLWGR KTVLLLCFLI FTITYLGFAL TRNTAGLGLL FIFYGLYQGI FRSVGKAFAS DFAPPHLHAS AIGWYSATIG LLQLFASLMA GVLWDRVGHQ AVFFYGAFFA AIGSLALALL IPGKSAAHR
|
| |