Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1069 |
Symbol | |
ID | 6200815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1226596 |
End bp | 1227981 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641705062 |
Product | MATE efflux family protein |
Protein accession | YP_001832201 |
Protein GI | 182678055 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.279345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAACTG AAACCGTGCA CAAGGTGACG ATCAGCCATT GGGCGGTGGT GCGTCTCGCT CTGCCGATGA CGCTCGGCCA TCTTTCGACG CCTCTGCTCG GCATTGCCGA TACGATGGTG ATCGGCAGGC TCGGCCAGGC GGCGCTTCTC GGCGCCATCG CCACGGCCGC CATGCTGTTC GATTTTGCTT TCTGGATCTT CAGCTTTCTG CGCATGGGCA CCGCCGCCCT CACCGCACAG GCGCTGGGAC GCGGCGACGA GGATGAACAG AATGCAACGC TTTTCCGGGC GCTGATCCTG GCCGTGGGAT TGGGCTTCAC CCTGATCCTG CTGCAAGTCC CGATTGCCAG GATCGGCTTT TATTTGCTCA ATGCCAGCCC GGAAGTCACA CGGGCGGCGC GCGCCTATTT CGATATCAGG ATCTTTTCCG CTCCCTTTGT CTTCATCAAT TATGCGGCAG TCGGCGCCTT CACCGGGCGC GGGCGGACCG ATATCGCCCT TGTGGTGCAG GTCTTCCTCA ATCTTCTCAA TATCGTTTTG AATGTCGCCT TTGTGTATGG GCTCGGCATG GGGATCAAAG GCTCGGCCAC GGGCACTTTG ATTGCCGAAA TCGCGGGCGC CAGCTTGAGT CTTTTCCTGC TTCTGCGCGA CCGCACATCC CTGCGTGCCC TGTCTCTCGC CTCTGTCTTC GCGCGGGAGA AATTCATCAG TGTCCTCAAA CTCAATTCCG ACATCATGAT CCGCACGGCG GCATTGATGT TCGCCTTCGC CTTTTTCACC GCGCAAAGCG CCAAGATTGG TGATGTCCAA CTCGCCGCCA ATGCGATCCT GATGAATCTC TTTTTGACCA GCGCTTATTT TCTTGATGGT TTCGCCACCG CCGCCGAGCA GATGAGCGGC CAATCACTCG GCGCTGGCGA TGCCTCGGGC TTTCGCGCCA GCGTTCGACT GACGAGTTTC TGGTGCTTTC TCTTCGCCGC CTTGGCCTTT ATGGTCGTGC AGACATTTGG CGCCTTTTTC ATCGACATTG TGAGCACCAA CGAGGCTGTG CGCGTCACTG CCCGGCAGGA CCTCCTTTTG GCCGCTCTGA CGCCGCTCGT CGGCTGTCTC GCCTTTGAAT TGGATGGCGT ATTCATTGGC GCGACCTGGA GCCGCGACAT GCGCAATATG ATGCTCGTCT CGCTCGGCCT TTATCTCGCA AGCTTTTATG CCTTGCAGAG CTTGAGACCG GATTTGGGCA ATCGCGGCCT GTGGTTCGCT CTGCTGGTCT TCCTCTCAAG CCGTGGCCTC ACGCTCGCCT GGCGTTATCG CACACTTTAT GCTCAGATTT TTTCACTCAC CCGATCGACC GCGGCAGCCC CCACGGCATC CACGAGCCGT GGATAA
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Protein sequence | MVTETVHKVT ISHWAVVRLA LPMTLGHLST PLLGIADTMV IGRLGQAALL GAIATAAMLF DFAFWIFSFL RMGTAALTAQ ALGRGDEDEQ NATLFRALIL AVGLGFTLIL LQVPIARIGF YLLNASPEVT RAARAYFDIR IFSAPFVFIN YAAVGAFTGR GRTDIALVVQ VFLNLLNIVL NVAFVYGLGM GIKGSATGTL IAEIAGASLS LFLLLRDRTS LRALSLASVF AREKFISVLK LNSDIMIRTA ALMFAFAFFT AQSAKIGDVQ LAANAILMNL FLTSAYFLDG FATAAEQMSG QSLGAGDASG FRASVRLTSF WCFLFAALAF MVVQTFGAFF IDIVSTNEAV RVTARQDLLL AALTPLVGCL AFELDGVFIG ATWSRDMRNM MLVSLGLYLA SFYALQSLRP DLGNRGLWFA LLVFLSSRGL TLAWRYRTLY AQIFSLTRST AAAPTASTSR G
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