| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1016 |
|---|
| Symbol | |
|---|
| ID | 6198176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 1166025 |
|---|
| End bp | 1166798 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641705008 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001832148 |
|---|
| Protein GI | 182678002 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.125705 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGA CCAATCGAAC AGTCTTGATT ACCGGCGGCA CCAGCGGGAT CGGCCTCACG
CTCGCCAATA GCCTCGTCGA GCGCGGAAAC ATCGTGATTG TCACAGGCCG TGATCAGAGC
AAGTTGACTT CTGTTTCGAA GGCCTTTCCG AGGCTGTACG TTGTTCGGAG CGATGTCACG
AAGCCGGACG ACATTCGGAG ACTTTACGAG GAGATTTTAT CCCGCTTTCC GAAGCTGGAT
GTTCTCGTCA ATAACGCGGG CATAATGCGG AATCTCAAGC TGGTGGAGCC ACACAGTCTC
GAAGACATTA CGCGTGAGGT CGATATTTTG CTGACTGGAG CAATCCGAAT GGTGCAGCAA
TTCCTGCCGC ATCTGCTGCA ACGTGACGAA GCCGCGATCG TCAACGTATC CTCGGGCCTC
GCTTTCGTCC CGATGCCTGT GTCGCCAGTC TATTCCGCCG CGAAAGCAGC CCTGCACGCC
TACACGCAAA GCCTGCGGGC GCAACTTTCC GACACGTCGA TCAACGTCAT TGAGTTGGCT
CCGCCACCAG TTGAAACGGA ATTGTTTAGA GGTGAGTTTG CCGAGGAGAT GAAGGGCCGG
AGCGCTATGG CACCCGACAA ACTGGTCAAA CAAACGTTAG CGGCGATCGA AGCCGGGAGA
ACGGAAATTA GGCCAGGCGC TGCGAACATT CTCAAGATCG CAAGCCGGAT CGCACCGGAT
TTCATATTCA AGCAAATGGT GAAACTTGGG CAGCCGAGGA ACCGTCCGAT CTAG
|
|---|
| Protein sequence | MKMTNRTVLI TGGTSGIGLT LANSLVERGN IVIVTGRDQS KLTSVSKAFP RLYVVRSDVT
KPDDIRRLYE EILSRFPKLD VLVNNAGIMR NLKLVEPHSL EDITREVDIL LTGAIRMVQQ
FLPHLLQRDE AAIVNVSSGL AFVPMPVSPV YSAAKAALHA YTQSLRAQLS DTSINVIELA
PPPVETELFR GEFAEEMKGR SAMAPDKLVK QTLAAIEAGR TEIRPGAANI LKIASRIAPD
FIFKQMVKLG QPRNRPI
|
|---|
| |