| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1004 |
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| Symbol | |
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| ID | 6200816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 1150045 |
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| End bp | 1150932 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641704995 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_001832136 |
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| Protein GI | 182677990 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.10193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGCAC GCACGGAAGA TTACACATAT TGTGAAGACA TGGTCCGGCG CGATGATCCC
GATCGCTGGC TGGCCTCTCT GTTCATTGAA CAGCCCTTCC GCAAACATGC CTATGCGCTT
TATGCTTTCA ATCTGGAAAT TGCCCGCGCG CGCGAGGTCG TGACTGAGCC CATTTTGGGC
GAAATCCGTT TTCAATGGTG GCGCGATATT CTGGAGCCGC CAGAAGGAGA AGACAACAAG
ATCGAGAGCG AGACCCAAGG TCATGTAATG GCCAATCCGG TGGCCGCCGC CGTGCTCGAT
ACGATCGAGC GTTTCGCGCT ACCGCGTGAA AGATTCATCG GCATGATCGA GGCGCGGACC
TTCGATCTCT ATGACGCGCC GATGCGCACT TTGGCCGAAC TCGAATCCTA TGGCCTTTCG
ACGGCTGGGA GCCTGTTCTA TCTCGTGGCC TCTGTCCTCT CCGGCCCGGA AACACCCGGT
CTTCTTGCCG CTGCCGAACC GGCCGGGCTC GCCTATGGAC TGACAGGCCT CATGCGCGCT
TTGCCGTGGC ATAGCGCGCG CGGCCAGGAT TATGTGCCCT GCGAAATGCT GAGCAGGCAT
AAAGCCGATC TCGAAGAAAT CATCGGCGGC ATAGCCTCGC CGGGCGTCTT TGCGACGCTC
GCCGAAATGC GCGGGCTCGC CCGCCAGCAG ATTAGCTTGT TCGAACAAAG GATCGCGGCG
GTTCCGCTCA AAGCACGCGC GGCCTTCCTG CCCGTGTGCT TTACCAGCCC CTATCTGAAA
CAAATGGATA AGCGCGGCTA TGCGCCTTTC CGGGTGCCGA TCATGCTACC GCAATGGCGC
AAGCAATGGA TTCTGTGGCG GGCCTCGAAA CGGTTGCGGG GGGTGTGA
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| Protein sequence | MHARTEDYTY CEDMVRRDDP DRWLASLFIE QPFRKHAYAL YAFNLEIARA REVVTEPILG
EIRFQWWRDI LEPPEGEDNK IESETQGHVM ANPVAAAVLD TIERFALPRE RFIGMIEART
FDLYDAPMRT LAELESYGLS TAGSLFYLVA SVLSGPETPG LLAAAEPAGL AYGLTGLMRA
LPWHSARGQD YVPCEMLSRH KADLEEIIGG IASPGVFATL AEMRGLARQQ ISLFEQRIAA
VPLKARAAFL PVCFTSPYLK QMDKRGYAPF RVPIMLPQWR KQWILWRASK RLRGV
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